Rhodothermus marinus DSM 4252 |
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Putative Rhodothermus marinus DSM 4252 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14152
| Sequence length: | GenBank #: | |
| Chromosome: | 3,261,604 bp | CP001807 (NC_013501) |
| plasmid pRMAR01: | 125,133 bp | CP001808 (NC_013502) |
REBASE acronym: Rma4252
Org_num: 5638
All begin Rmar_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1088 | TonB-dependent receptor | |||
| 1089 | M | M.RmaSGORF1034P (97% identity) | M.Rma4252ORF1089P | |
| 1090 | transcriptional regulator | |||
| 1091 | S | S.RmaSGORF1034P (94% identity) | S.Rma4252ORF1089P | |
| 1092 | 223 aa hypothetical protein | |||
| 1093 | R | RmaAA338ORF11430P (99% identity) | Rma4252ORF1089P | |
| 1094 | protein of unknown function DUF45 | |||
| plasmid pRMAR01 | ||||
| 2891 | pseudogene | |||
| 2892 | R | TspPKX82ORF1070P (58% identity) | Rma4252ORF2892P | |
| 2893 | restriction modification system DNA specificity | |||
| 2892 | type III restriction protein res subunit | |||
| 2893 | S | S.RspRSORF734P (34% identity) | S.Rma4252ORF2893P | |
| 2894 | 231 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 325 | 217 aa hypothetical protein | |||
| 326 | RM | RmaSGORF308P (95% identity) | Rma4252ORF326P | |
| 327 | 278 aa conserved hypothetical protein | |||
| 2523 | metal-dependent hydrolase | |||
| 2524 | R | RmaSGORF2535P (98% identity) | CTAG | Rma4252ORF2524P |
| 2525 | DNA methylase N-4/N-6 domain protein | |||
| 2524 | cytoplasmic protein | |||
| 2525 | M | M.RmaSGORF2535P (95% identity) | CTAG | M.Rma4252ORF2525P |
| 2526 | 191 aa conserved hypothetical protein | |||
| plasmid pRMAR01 | ||||
| 2888 | 178 aa hypothetical protein | |||
| 2889 | R | AacAA1ORF2951P (50% identity) | GATATC | Rma4252ORF2890P |
| 2890 | M | M.Cspisl2ORF11830P (58% identity) | GATATC | M.Rma4252ORF2890P |
| 2891 | pseudogene | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRMAR01 | ||||
| 2887 | 65 aa hypothetical protein | |||
| 2888 | M | 178 aa hypothetical protein | M.Rma4252ORF2888P | |
| 2889 | Type II site-specific deoxyribonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 44 | PKD domain-containing protein | |||
| 45 | R | RmaSGMcrBP (87% identity) | Rma4252McrBP | |
| 46 | ATPase associated with various cellular | |||
| 45 | protein of unknown function DUF524 | |||
| 46 | R | ATPase associated with various cellular | Rma4252McrB2P | |
| 47 | excinuclease ABC, B subunit | |||