Paludisphaera borealis PX4 |
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Putative Paludisphaera borealis PX4 RM systems
Ref: Ivanova,A.A. et al. Front. Microbiol. 8, 412 (2017)
REBASE ref # 23830
| Sequence length: | GenBank #: | |
| Chromosome: | 7,497,544 bp | CP019082 |
| plasmid PALBO2: | 42,519 bp | CP019084 |
REBASE acronym: PboPX4
Org_num: 22811
All begin BSF38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1 | metallopeptidase | |||
| 2 | R | AbrPbN1ORF17190P (68% identity) | CGAGNNNNNNTCGC | PboPX4IP |
| 3 | S | S.PbaTBK1rORF46050P (45% identity) | CGAGNNNNNNTCGC | S.PboPX4I |
| 4 | 337 aa hypothetical protein | |||
| 5 | M | M.Dac2973ORF1334P (75% identity) | CGAGNNNNNNTCGC | M.PboPX4I |
| 6 | 99 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2000 | DNA replication and repair protein RecF | |||
| 2001 | M | M.SzoXJ20ORFOP (63% identity) | M.PboPX4ORF2001P | |
| 2002 | R | BdiXF19ORF46740P (72% identity) | PboPX4ORF2001P | |
| 2003 | 343 aa hypothetical protein | |||
| 2193 | RNA polymerase sigma factor SigA | |||
| 2194 | M | M.PspPL62ORF7285P (63% identity) | M.PboPX4ORF2194P | |
| 2195 | 30S ribosomal protein S1 | |||
| 2344 | alpha/beta-hydrolase-type carbohydrate | |||
| 2345 | M | M.CspESFC1ORFHP (40% identity) | TTCGAA | M.PboPX4II |
| 2346 | Methionine--tRNA ligase | |||
| 3074 | Transcriptional regulatory protein ZraR | |||
| 3075 | M | M.PspPL62ORF385P (76% identity) | M.PboPX4ORF3075P | |
| 3076 | 742 aa hypothetical protein | |||
| 3127 | 145 aa hypothetical protein | |||
| 3129 | V | V.PspPL62ORF230P (80% identity) | V.PboPX4ORF3130P | |
| 3130 | M | M.PspPL62ORF230P (74% identity) | M.PboPX4ORF3130P | |
| 3131 | 232 aa hypothetical protein | |||
| 3179 | L-glyceraldehyde 3-phosphate reductase | |||
| 3180 | R | Lsp15MVORFMP (39% identity) | PboPX4ORF3181P | |
| 3181 | M | M.Sth15344ORF14020P (64% identity) | M.PboPX4ORF3181P | |
| 3182 | Cobalt-zinc-cadmium resistance protein CzcC | |||
| plasmid PALBO2 | ||||
| 20033 | RecB family exonuclease | |||
| 20034 | RM | Ael3563ORF9960P (63% identity) | PboPX4ORF20034P | |
| 20037 | Multifunctional conjugation protein TraI | |||