Clostridium perfringens Del1 |
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Putative Clostridium perfringens Del1 RM systems
Ref: Li,C. et al. unpublished
REBASE ref # 24219
| Sequence length: | GenBank #: | |
| Chromosome: | 3,559,163 bp | CP019576 |
| plasmid pDel1_1: | 82,596 bp | CP019577 |
| plasmid pDel1_2: | 69,827 bp | CP019578 |
| plasmid pDel1_4: | 49,728 bp | CP019580 |
| plasmid pDle1_3: | 49,582 bp | CP019579 |
REBASE acronym: CpeDel1
Org_num: 23496
All begin BXT94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14525 | metal-dependent hydrolase | |||
| 14530 | R | Cpe8503IP (98% identity) | CpeDel1ORF14550P | |
| 14535 | 474 aa hypothetical protein | |||
| 14540 | 395 aa hypothetical protein | |||
| 14545 | S | S.Cpe905ORF2900P (62% identity) | S.CpeDel1ORF14550P | |
| 14550 | M | M.Cpe45ORF3105P (98% identity) | M.CpeDel1ORF14550P | |
| 14555 | 357 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2370 | 61 aa hypothetical protein | |||
| 2375 | M | M.CpeNE18ORF2080P (100% identity) | M.CpeDel1ORF2375P | |
| 2380 | endolysin | |||
| 5495 | 143 aa hypothetical protein | |||
| 5500 | M | M.Cpe061ORF7745P (100% identity) | M.CpeDel1ORF5500P | |
| 5505 | 159 aa hypothetical protein | |||
| 5750 | 687 aa hypothetical protein | |||
| 5755 | M | M.CpeTS1ORF18420P (99% identity) | M.CpeDel1ORF5755P | |
| 5760 | ImmA/IrrE family metallo-endopeptidase | |||
| 12520 | 142 aa hypothetical protein | |||
| 12525 | M | M.Cpe3BORF10320P (88% identity) | M.CpeDel1ORF12525P | |
| 12530 | 61 aa hypothetical protein | |||
| 13835 | chromosome partitioning protein ParB | |||
| ??? | S | S.CpeNE18ORF12755P (100% identity) | S.CpeDel1ORF13845P | |
| 13845 | RM | CpeNE18ORF12755P (100% identity) | CpeDel1ORF13845P | |
| 13850 | 67 aa hypothetical protein | |||
| 16085 | peptide-methionine (S)-S-oxide reductase | |||
| 16090 | M | M.Cpe5ORF7415P (100% identity) | GTATAC | M.CpeDel1ORF16090P |
| 16095 | phage infection protein | |||
| plasmid pDel1_1 | ||||
| 16570 | 72 aa hypothetical protein | |||
| ??? | M | M.CpeJJCORFFP (79% identity) | M.CpeDel1ORFAP | |
| 16580 | 94 aa hypothetical protein | |||
| 16645 | 101 aa hypothetical protein | |||
| 16650 | M | M.Cpe1ORF37P (100% identity) | M.CpeDel1ORF16650P | |
| 16655 | 344 aa hypothetical protein | |||
| plasmid pDel1_2 | ||||
| 16945 | 72 aa hypothetical protein | |||
| ??? | M | M.Csp1R1ORF15145P (100% identity) | M.CpeDel1ORF16950P | |
| 16955 | 94 aa hypothetical protein | |||
| 17040 | 101 aa hypothetical protein | |||
| 17045 | M | M.Csp1R1ORF15055P (100% identity) | M.CpeDel1ORF17045P | |
| 17050 | 340 aa hypothetical protein | |||
| plasmid pDel1_4 | ||||
| 17655 | 72 aa hypothetical protein | |||
| ??? | M | M.CpeCW3ORFAP (100% identity) | M.CpeDel1ORF17660P | |
| 17665 | 94 aa hypothetical protein | |||
| 17735 | 101 aa hypothetical protein | |||
| 17740 | M | M.CpeS10ORF15250P (100% identity) | M.CpeDel1ORF17740P | |
| 17745 | 340 aa hypothetical protein | |||
| plasmid pDle1_3 | ||||
| 17375 | 71 aa hypothetical protein | |||
| 17380 | M | M.Cpe4969ORF1715P (98% identity) | M.CpeDel1ORF17380P | |
| 17385 | 68 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 825 | 67 aa hypothetical protein | |||
| 830 | R | Bta27643ORF7360P (58% identity) | CpeDel1ORF835P | |
| 835 | M | M.Msp3686dORF2035P (55% identity) | M.CpeDel1ORF835P | |
| 840 | chromosome partitioning protein ParB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5575 | 103 aa hypothetical protein | |||
| 5580 | R | Cpe83McrBP (99% identity) | CpeDel1McrBP | |
| 5585 | R | Cpe3842McrCP (100% identity) | CpeDel1McrCP | |
| 5590 | 127 aa hypothetical protein | |||