Escherichia coli Ecol_881 |
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Putative Escherichia coli Ecol_881 RM systems
Ref: Stoesser et al,N. unpublished
REBASE ref # 24216
| Sequence length: | GenBank #: | |
| Chromosome: | 5,262,974 bp | CP019029 |
| plasmid pEC881_1: | 147,346 bp | CP019028 |
| plasmid pEC881_2: | 109,344 bp | CP019027 |
| plasmid pEC881_KPC: | 59,373 bp | CP019026 |
REBASE acronym: Eco881
Org_num: 23505
All begin BE930_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3830 | transposase | |||
| 3835 | M | M.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | M.Eco881ORF3835P |
| 3840 | S | S.Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | S.Eco881ORF3835P |
| 3845 | 227 aa hypothetical protein | |||
| 3850 | cold-shock protein | |||
| 3855 | R | Ecos142ORF9685P (100% identity) | GATGNNNNNNTAC | Eco881ORF3835P |
| 3860 | metal-dependent hydrolase | |||
| 15005 | restriction endonuclease | |||
| 15010 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco881ORF15015P |
| 15015 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco881ORF15015P |
| 15020 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco881ORF15015P |
| 15025 | 113 aa hypothetical protein | |||
| plasmid pEC881_1 | ||||
| 1965 | prevent-host-death family protein | |||
| ??? | M | M.Ecos2020ORFGP (100% identity) | M.Eco881ORF1970P | |
| 1975 | S | S.EcoS497ORF620P (100% identity) | S.Eco881ORF1970P | |
| 1980 | R | KpnKPH1ORF27575P (100% identity) | Eco881ORF1970P | |
| 1985 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2295 | 140 aa hypothetical protein | |||
| 2300 | M | M.EcoDEC12DORF2666P (98% identity) | GATC | M.Eco881ORF2300P |
| 2305 | protein ninE | |||
| 3530 | phosphohydrolase | |||
| 3535 | M | M.Ecos142DcmP (100% identity) | CCWGG | M.Eco881DcmP |
| 3540 | V | V.Ecos142DcmP (100% identity) | V.Eco881DcmP | |
| 3545 | drug/metabolite exporter YedA | |||
| 9815 | endonuclease | |||
| 9820 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco881ORF9820P |
| 9825 | 75 aa hypothetical protein | |||
| 17180 | LexA family transcriptional regulator | |||
| 17185 | M | M.SdyFF10ORF21495P (100% identity) | GATC | M.Eco881ORF17185P |
| 17190 | 162 aa hypothetical protein | |||
| 21515 | cell division protein DamX | |||
| 21520 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco881DamP |
| 21525 | ribulose-phosphate 3-epimerase | |||
| 22080 | transporter | |||
| 22085 | M | M.Ecos142ORF2405P (100% identity) | M.Eco881ORF22085P | |
| 22090 | Fis family transcriptional regulator | |||
| 26890 | 64 aa hypothetical protein | |||
| 26895 | M | M.SspPIBORF6330P (100% identity) | M.Eco881ORF26895P | |
| 26900 | transcriptional regulator | |||
| plasmid pEC881_1 | ||||
| 2100 | 0 aa hypothetical protein | |||
| 2105 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco881ORF2105P |
| 2110 | 73 aa hypothetical protein | |||
| plasmid pEC881_2 | ||||
| 945 | 76 aa hypothetical protein | |||
| 950 | M | M.Ecos9ORF25140P (100% identity) | M.Eco881ORF950P | |
| 955 | 269 aa hypothetical protein | |||
| plasmid pEC881_KPC | ||||
| 520 | transposase | |||
| 525 | M | M.UbapDS2ORFAP (100% identity) | CCWGG | M.Eco881ORF525P |
| 145 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco881ORF525P |
| 150 | glutathione S-transferase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15000 | GTPase | |||
| 15005 | R | Ssp28760MrrP (100% identity) | Eco881MrrP | |
| 15010 | type I restriction-modification system | |||
| 15025 | 113 aa hypothetical protein | |||
| 15030 | R | SenHNK130McrBP (99% identity) | Eco881McrBP | |
| 15035 | R | SenHNK130McrCP (100% identity) | Eco881McrCP | |