Escherichia coli Ecol_542 |
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Putative Escherichia coli Ecol_542 RM systems
Ref: Stoesser et al,N. unpublished
REBASE ref # 24216
| Sequence length: | GenBank #: | |
| Chromosome: | 5,259,387 bp | CP018970 |
| plasmid pEC542_1: | 82,364 bp | CP018969 |
REBASE acronym: Eco542
Org_num: 23509
All begin BE966_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26340 | 112 aa hypothetical protein | |||
| 26345 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Eco542ORF26355P |
| 26350 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.Eco542ORF26355P |
| 26355 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Eco542ORF26355P |
| 26360 | restriction endonuclease | |||
| 28250 | 52 aa hypothetical protein | |||
| 28255 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco542ORF28260P |
| 28260 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco542ORF28260P |
| 28265 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco542ORF28260P |
| 28270 | 267 aa hypothetical protein | |||
| plasmid pEC542_1 | ||||
| 705 | transposase | |||
| 710 | R | KpnKPH1ORF27575P (100% identity) | Eco542ORF720P | |
| 715 | S | S.SenceORFJP (100% identity) | S.Eco542ORF720P | |
| ??? | M | M.SenceORFJP (100% identity) | M.Eco542ORF720P | |
| 725 | prevent-host-death family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2960 | 75 aa hypothetical protein | |||
| 2965 | M | M.SspS13ORF8710P (99% identity) | GATC | M.Eco542ORF2965P |
| 2970 | endonuclease | |||
| 3915 | 71 aa hypothetical protein | |||
| 3920 | M | M.KpnYN1ORFGP (89% identity) | M.Eco542ORF3920P | |
| 3925 | transcriptional regulator | |||
| 6335 | TrmB family transcriptional regulator | |||
| 6340 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco542ORF6340P |
| 6355 | 92 aa hypothetical protein | |||
| 10095 | drug/metabolite exporter YedA | |||
| 10100 | V | V.SflC32DcmP (74% identity) | V.Eco542DcmP | |
| 10105 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco542DcmP |
| 10110 | phosphohydrolase | |||
| 11910 | 177 aa hypothetical protein | |||
| 11915 | M | M.SglORF828P (100% identity) | M.Eco542ORF11915P | |
| 11920 | 116 aa hypothetical protein | |||
| 14990 | cell division protein DamX | |||
| 14995 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco542DamP |
| 15000 | ribulose-phosphate 3-epimerase | |||
| 15610 | transporter | |||
| 15615 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco542ORF15615P |
| 15620 | Fis family transcriptional regulator | |||
| 20205 | 106 aa hypothetical protein | |||
| ??? | M | M2.Ecoi127aORF1280P (100% identity) | M1.Eco542ORF20210P | |
| 20215 | VRR-NUC domain-containing protein | |||
| 20220 | M | M1.Ecoi127aORF1280P (100% identity) | M2.Eco542ORF20210P | |
| 20225 | 73 aa hypothetical protein | |||
| 20760 | 87 aa hypothetical protein | |||
| 20765 | M | M.EcoS44ORF14965P (100% identity) | M.Eco542ORF20765P | |
| 20770 | transcriptional regulator | |||
| 25935 | 83 aa hypothetical protein | |||
| 25940 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco542ORF25940P |
| 25945 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco542ORF25940P |
| 25950 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco542ORF25940P |
| 25955 | restriction endonuclease | |||
| plasmid pEC542_1 | ||||
| 620 | 73 aa hypothetical protein | |||
| 625 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco542ORF625P |
| 630 | 0 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25950 | restriction endonuclease | |||
| 25955 | R | EcosS9McrCP (100% identity) | Eco542McrCP | |
| 25960 | R | EcosS3McrBP (100% identity) | Eco542McrBP | |
| 25965 | 60 aa hypothetical protein | |||