Salmonella enterica subsp. enterica serovar Typhimurium RM10607 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium RM10607 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 23631
| Sequence length: | GenBank #: | |
| Chromosome: | 4,889,706 bp | CP013720 |
| plasmid pRM10607: | 93,925 bp | CP013721 |
REBASE acronym: Sen10607
Org_num: 23468
All begin SEETMRM10607_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24170 | 110 aa hypothetical protein | |||
| 24175 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10607ORF24180P |
| 24180 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen10607ORF24180P |
| 24185 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10607ORF24180P |
| 24190 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10485 | Permease of the drug metabolite transporter | |||
| 10490 | V | Very-short-patch mismatch repair endonuclease | V.Sen10607DcmP | |
| 10495 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10607DcmP |
| 10500 | metal-dependent phosphohydrolase | |||
| 10730 | Holliday junction resolvase | |||
| 10735 | M | M.Sen3668ORF3098P (96% identity) | M.Sen10607ORF10735P | |
| 10740 | Primosomal protein I | |||
| 14075 | Phage EaA protein | |||
| 14080 | M | M.Sens29958ORF6205P (100% identity) | M.Sen10607ORF14080P | |
| 14085 | Phage EaD protein | |||
| 14600 | Phage replication protein | |||
| 14605 | M | M.Sen2190ORF5830P (100% identity) | M.Sen10607ORF14605P | |
| 14610 | Zinc-finger containing protein | |||
| 18265 | DNA-binding protein Fis | |||
| 18270 | M | Adenine-specific methyltransferase | ATGCAT | M.Sen10607ORF18270P |
| 18275 | 54 aa hypothetical protein | |||
| 18755 | Ribulose-phosphate 3-epimerase | |||
| 18760 | M | M.SenRM079Dam3P (100% identity) | GATC | M.Sen10607DamP |
| 18765 | DamX, an inner membrane protein involved in | |||
| 24000 | ABC-type spermidine or putrescine | |||
| 24005 | RM | StyUK1IV (100% identity) | GATCAG | Sen10607ORF24005P |
| 24010 | ATPase-like protein | |||
| plasmid pRM10607 | ||||
| 25350 | cytoplasmic protein | |||
| 25355 | M | M.StyUK1ORFAP (100% identity) | M.Sen10607ORF25355P | |
| 25360 | cytoplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2155 | metabolite transport protein | |||
| 2160 | M | M.Sens29958ORF17880P (100% identity) | CAGAG | M.Sen10607ORF2160P |
| 2165 | R | StyUK1IP (99% identity) | CAGAG | Sen10607ORF2160P |
| 2170 | 44 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24185 | Type I restriction-modification system, | |||
| 24190 | R | StyUK1MrrP (100% identity) | Sen10607MrrP | |
| 24195 | 95 aa hypothetical protein | |||