Vibrio anguillarum LMG12010 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio anguillarum LMG12010 RM systems
Ref: Ronneseth,A. et al. J. Fish Dis. (2017) In press
REBASE ref # 23791
| Sequence length: | GenBank #: | |
| chromosome I: | 3,060,915 bp | CP011468 |
| chromosome II: | 1,045,941 bp | CP011469 |
REBASE acronym: Van12010
Org_num: 23143
All begin PN43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 10255 | integrase | |||
| ??? | M | M.VanT265ORF10575P (100% identity) | M.Van12010ORF10260P | |
| 10265 | 291 aa hypothetical protein | |||
| 10270 | chromosome segregation protein SMC | |||
| ??? | S | S.VanT265ORF10575P (100% identity) | S.Van12010ORF10260P | |
| 10280 | R | VanVA1ORF10565P (100% identity) | Van12010ORF10260P | |
| 10285 | restriction endonuclease | |||
| 11845 | 385 aa hypothetical protein | |||
| ??? | R | VanVA1ORF12185P (100% identity) | Van12010ORF11880P | |
| 11855 | abortive phage infection protein | |||
| 11860 | DNA methylase N-4 | |||
| 11865 | 68 aa hypothetical protein | |||
| 11870 | elongation factor Ts | |||
| 11875 | 132 aa hypothetical protein | |||
| 11880 | M | M.VanVA1ORF12185P (99% identity) | M.Van12010ORF11880P | |
| 11885 | 0 aa hypothetical protein | |||
| 11890 | S | S.VanVA1ORF12185P (100% identity) | S.Van12010ORF11880P | |
| 11895 | 331 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2515 | cell division protein DamX | |||
| 2520 | M | M.VanVIB12DamP (100% identity) | M.Van12010DamP | |
| 2525 | ribulose-phosphate 3-epimerase | |||
| 11855 | abortive phage infection protein | |||
| 11860 | M | M.Vvu0208ORFCP (94% identity) | M.Van12010ORF11860P | |
| 11865 | 68 aa hypothetical protein | |||
| chromosome II | ||||
| 17075 | 95 aa hypothetical protein | |||
| 17080 | M | M.VanVA1ORF17830P (100% identity) | M.Van12010ORF17080P | |
| 17085 | 85 aa hypothetical protein | |||
| 17430 | trypsin | |||
| 17435 | M | M.VanVA1ORF17830P (100% identity) | M.Van12010ORF17435P | |
| 17440 | 85 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 10280 | restriction endonuclease subunit R | |||
| 10285 | R | VanVA1MrrP (100% identity) | Van12010MrrP | |
| 10290 | DNA-binding protein | |||