Klebsiella variicola GJ3 |
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Putative Klebsiella variicola GJ3 RM systems
Ref: Di,D.Y. et al. J. Antimicrob. Chemother. (2017) In press
REBASE ref # 24163
| Sequence length: | GenBank #: | |
| Chromosome: | 5,599,927 bp | CP017289 |
| plasmid pKPGJ-3a: | 108,857 bp | CP017285 |
| plasmid pKPGJ-3b: | 92,231 bp | CP017286 |
| plasmid pKPGJ-3c: | 73,385 bp | CP017287 |
REBASE acronym: KvaGJ3
Org_num: 23150
All begin BBD65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pKPGJ-3a | ||||
| 26655 | transposase | |||
| 26660 | R | KvaGJ1ORF26750P (100% identity) | KvaGJ3ORF27635P | |
| 26665 | S | S.KvaGJ1ORF26750P (100% identity) | S.KvaGJ3ORF27635P | |
| 26670 | M | M.KvaGJ1ORF26750P (100% identity) | M.KvaGJ3ORF27635P | |
| 26675 | transposase | |||
| plasmid pKPGJ-3c | ||||
| 27620 | transposase | |||
| 27625 | R | KvaGJ1ORF26750P (100% identity) | KvaGJ3ORF27635P | |
| 27630 | S | S.KvaGJ1ORF26750P (100% identity) | S.KvaGJ3ORF27635P | |
| 27635 | M | M.KvaGJ1ORF26750P (100% identity) | M.KvaGJ3ORF27635P | |
| 27640 | type IV conjugative transfer system coupling | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2710 | 0 aa hypothetical protein | |||
| 2715 | M | M.KvaGJ1ORF2720P (100% identity) | M.KvaGJ3ORF2715P | |
| 2720 | ATPase | |||
| 8935 | 64 aa hypothetical protein | |||
| 8940 | M | M.KvaGJ1ORF8945P (100% identity) | M.KvaGJ3ORF8940P | |
| 8945 | 125 aa hypothetical protein | |||
| 16955 | drug/metabolite exporter YedA | |||
| 16960 | V | V.Kvai0ORF1724P (100% identity) | V.KvaGJ3ORF16965P | |
| 16965 | M | M.KvaGJ1ORF16965P (100% identity) | CCWGG | M.KvaGJ3ORF16965P |
| 16970 | phosphohydrolase | |||
| 24210 | ribulose-phosphate 3-epimerase | |||
| 24215 | M | M.Kvai0DamP (100% identity) | GATC | M.KvaGJ3DamP |
| 24220 | cell division protein DamX | |||
| plasmid pKPGJ-3a | ||||
| 26300 | 73 aa hypothetical protein | |||
| 26305 | M | M.KvaGJ1ORF26390P (100% identity) | M.KvaGJ3ORF26305P | |
| 26310 | DNA breaking-rejoining protein | |||
| 26365 | transposase | |||
| 26370 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.KvaGJ3ORF26370P |
| 26375 | R | YpsR1ORFAP (99% identity) | CCWGG | KvaGJ3ORF26370P |
| 26380 | 189 aa hypothetical protein | |||
| plasmid pKPGJ-3b | ||||
| 26995 | 76 aa hypothetical protein | |||
| 27000 | M | M.SmaQC11ORF52800P (100% identity) | M.KvaGJ3ORF27000P | |
| 27005 | 73 aa hypothetical protein | |||
| plasmid pKPGJ-3c | ||||
| 27500 | recombinase | |||
| 27505 | M | M.Xca80ORFEP (100% identity) | M.KvaGJ3ORF27505P | |
| 27510 | 73 aa hypothetical protein | |||