Cuniculiplasma divulgatum PM4 (=JCM 30641; |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Cuniculiplasma divulgatum PM4 (=JCM 30641; RM systems
Ref: Toshchakov,V.S. unpublished
REBASE ref # 23625
Complete sequence: 1,878,916 bp
GenBank #: LT719092
REBASE acronym: CdiPM4
Org_num: 22739
All begin CPM_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 557 | 88 aa hypothetical protein | |||
| 558 | R | AflGORF8605P (69% identity) | GGATG | CdiPM4ORF559P |
| 559 | M | type IIS restriction-modification system DNA | GGATG | M1.CdiPM4ORF559P |
| 560 | M | M2.AflGORF8605P (48% identity) | GGATG | M2.CdiPM4ORF559P |
| 561 | MazF toxin | |||
| 586 | heavy metal reductase | |||
| 587 | M | M.UbaMDORFY8P (100% identity) | M.CdiPM4ORF587P | |
| 588 | DNA gyrase subunit B | |||
| 874 | 391 aa hypothetical protein | |||
| 876 | M | M.UbaMDORFU6P (99% identity) | M.CdiPM4ORF876P | |
| 877 | 93 aa hypothetical protein | |||
| 1387 | ArsR family transcriptional regulator | |||
| 1388 | M | M.Cdi30642ORF1389P (98% identity) | M.CdiPM4ORF1388P | |
| 1389 | DNA-directed RNA polymerase subunit L | |||
| 1426 | 257 aa hypothetical protein | |||
| 1427 | RM | UbaMDORFW9P (49% identity) | CdiPM4ORF1427P | |
| 1428 | integrase | |||
| 1580 | cupin | |||
| 1581 | M | M.Cdi30642ORF1591P (98% identity) | M.CdiPM4ORF1581P | |
| 1582 | 307 aa hypothetical protein | |||
| 1759 | Orc1/Cdc6 family replication initiation protein | |||
| 1760 | RM | UbaMDORFM11P (90% identity) | CdiPM4ORF1760P | |
| 1761 | XRE family transcriptional regulator fused to Zn | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 52 | metal-dependent hydrolase of the beta-lactamase | |||
| 53 | M | M.UbaMDORFR1P (51% identity) | M.CdiPM4ORF53P | |
| 54 | R | Cdi30642ORF85P (99% identity) | CdiPM4ORF53P | |
| 55 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 89 | VapC toxin | |||
| 90 | R | Cdi30642ORF121P (99% identity) | CdiPM4ORF90P | |
| 91 | nucleotidyltransferase toxin | |||