Salmonella enterica subsp. enterica serovar Djakarta S-1087 |
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Putative Salmonella enterica subsp. enterica serovar Djakarta S-1087 RM systems
Ref: Robertson,J. et al. unpublished
REBASE ref # 24135
Complete sequence: 4,668,861 bp
GenBank #: CP019409
REBASE acronym: Sen1087
Org_num: 23123
All begin LFZ8_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23135 | 106 aa hypothetical protein | |||
| 23140 | S | S.SenST01ORF605P (27% identity) | S1.Sen1087ORF23165P | |
| 23145 | S | S.CfrLORF20550P (35% identity) | S2.Sen1087ORF23165P | |
| 23150 | transposase | |||
| 23155 | transposase | |||
| 23160 | S | S.Sen51958I (30% identity) | S3.Sen1087ORF23165P | |
| 23165 | M | M.Kmi7756ORF4945P (99% identity) | M.Sen1087ORF23165P | |
| 23170 | R | SenUA36ORF834P (99% identity) | Sen1087ORF23165P | |
| 23175 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | 59 aa hypothetical protein | |||
| 3015 | M | M.Cfr1443ORF8435P (95% identity) | M.Sen1087ORF3015P | |
| 3020 | 212 aa hypothetical protein | |||
| 3070 | 67 aa hypothetical protein | |||
| 3075 | M | M.CfrF3517ORF7310P (98% identity) | M.Sen1087ORF3075P | |
| 3080 | Pyocin large subunit | |||
| 10715 | drug/metabolite exporter YedA | |||
| 10720 | V | very short patch repair endonuclease | V.Sen1087DcmP | |
| 10725 | M | M.SspsA7DcmP (100% identity) | CCWGG | M.Sen1087DcmP |
| 10730 | phosphohydrolase | |||
| 17500 | Fis family transcriptional regulator | |||
| 17505 | M | M.SenS686ORF3250P (100% identity) | ATGCAT | M.Sen1087ORF17505P |
| 17510 | DUF2556 domain-containing protein | |||
| 18010 | ribulose-phosphate 3-epimerase | |||
| 18015 | M | DNA adenine methylase | GATC | M.Sen1087DamP |
| 18020 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1905 | MFS transporter | |||
| 1910 | M | M.Sen8300ORF16170P (100% identity) | CAGAG | M.Sen1087ORF1910P |
| 1915 | R | Sens30601ORF17060P (99% identity) | CAGAG | Sen1087ORF1910P |
| 1920 | cytochrome ubiquinol oxidase subunit I | |||