Escherichia coli XH990 |
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Putative Escherichia coli XH990 RM systems
Ref: Hua,X. and Yu,Y. unpublished
REBASE ref # 24129
| Sequence length: | GenBank #: | |
| Chromosome: | 4,883,427 bp | CP019359 |
| plasmid pXH990_1: | 275,899 bp | CP019356 |
| plasmid pXH990_2: | 67,403 bp | CP019357 |
| plasmid pXH990_3: | 86,028 bp | CP019358 |
REBASE acronym: EcoXH990
Org_num: 23100
All begin BW242_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4600 | cell division protein DamX | |||
| 4605 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoXH990DamP |
| 4610 | ribulose-phosphate 3-epimerase | |||
| 5185 | transporter | |||
| 5190 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoXH990ORF5190P |
| 5195 | Fis family transcriptional regulator | |||
| 7410 | transcriptional regulator | |||
| ??? | R | EcoO157SORFBP (100% identity) | EcoXH990ORF7415P | |
| 7420 | 61 aa hypothetical protein | |||
| 8860 | autotransporter domain-containing protein | |||
| 8865 | R | Sens24184ORF5380P (99% identity) | C | EcoXH990ORF8865P |
| 8870 | DNA primase | |||
| 8985 | 164 aa hypothetical protein | |||
| 8990 | M | M.EcoS104ORF4290P (100% identity) | GATC | M.EcoXH990ORF8990P |
| 8995 | LexA family transcriptional regulator | |||
| 12865 | HD domain-containing protein | |||
| 12870 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.EcoXH990DcmP |
| 12875 | V | V.EcosEC71DcmP (100% identity) | V.EcoXH990DcmP | |
| 12880 | EamA family transporter | |||
| 20710 | protein ninE | |||
| 20715 | M | M.Eco802CCORF31540P (100% identity) | GATC | M.EcoXH990ORF20715P |
| 20720 | protein ninB | |||
| plasmid pXH990_1 | ||||
| 420 | 277 aa hypothetical protein | |||
| 425 | M | M.YpsF1ORFDP (100% identity) | M1.EcoXH990ORF425P | |
| 430 | DNA-binding protein | |||
| 530 | 202 aa hypothetical protein | |||
| 535 | M | M.YpsF1ORFBP (100% identity) | M.EcoXH990ORF535P | |
| 540 | 108 aa hypothetical protein | |||
| 1120 | nuclease | |||
| 1125 | M | M.EcoSTEC384ORFBP (100% identity) | M.EcoXH990ORF1125P | |
| 1130 | 439 aa hypothetical protein | |||
| plasmid pXH990_2 | ||||
| 2005 | 73 aa hypothetical protein | |||
| 2010 | M | M.Xca80ORFEP (100% identity) | M.EcoXH990ORF2010P | |
| 2015 | 59 aa hypothetical protein | |||
| plasmid pXH990_3 | ||||
| 2230 | 73 aa hypothetical protein | |||
| 2235 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoXH990ORF2235P | |
| 2240 | 97 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24535 | 100 aa hypothetical protein | |||
| 24540 | R | Ecos19ORF20250P (100% identity) | EcoXH990ORF24545P | |
| 24545 | M | M.EcoW619ORFHP (100% identity) | M.EcoXH990ORF24545P | |
| 24550 | ATP-dependent helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24300 | 113 aa hypothetical protein | |||
| 24305 | R | EcoW619GmrSDP (100% identity) | EcoXH990GmrSDP | |
| 24310 | DUF1127 domain-containing protein | |||