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Putative Rhodoferax antarcticus DSM 24876 RM systems
Ref: Kim,Y.J. et al. unpublished
REBASE ref # 24114
Complete sequence: 3,916,274 bp
GenBank #: CP019240
REBASE acronym: Ran24876
Org_num: 23096
All begin RA876_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
30 | ATPase | |||
??? | R | Rsp5965ORF12030P (36% identity) | Ran24876ORF35P | |
40 | 131 aa hypothetical protein | |||
2415 | 409 aa hypothetical protein | |||
2420 | M | M.PspCG912ORFJP (79% identity) | M.Ran24876ORF2420P | |
2425 | 302 aa hypothetical protein | |||
2430 | S | S.GspTET16ORF13925P (31% identity) | S.Ran24876ORF2420P | |
2435 | 82 aa hypothetical protein | |||
2440 | toxin-antitoxin system, toxin component, PIN | |||
2445 | R | PspCG912ORFJP (80% identity) | Ran24876ORF2420P | |
2450 | 170 aa hypothetical protein | |||
8190 | nicotinamidase | |||
8195 | M | M.BceH111I (87% identity) | M.Ran24876ORF8195P | |
8200 | cell filamentation protein Fic | |||
8205 | 348 aa hypothetical protein | |||
8210 | S | S.PspL5B5ORF30815P (80% identity) | S.Ran24876ORF8195P | |
8215 | GTP pyrophosphokinase | |||
8225 | GIY-YIG nuclease | |||
8230 | R | Ach8003IIP (90% identity) | Ran24876ORF195P | |
8235 | 1272 aa hypothetical protein | |||
11205 | 1055 aa hypothetical protein | |||
11210 | S | S2.CneNH9ORF1275P (40% identity) | S.Ran24876ORF11215P | |
11215 | M | M.Nar6680ORF482P (76% identity) | M.Ran24876ORF11215P | |
11220 | 208 aa hypothetical protein | |||
14285 | 409 aa hypothetical protein | |||
14290 | R | Psp3121IIP (83% identity) | Ran24876ORF14315P | |
14295 | XRE family transcriptional regulator | |||
14300 | addiction module antidote protein | |||
14305 | addiction module killer protein | |||
14310 | S | S.Hfo6591II (54% identity) | S.Ran24876ORF14315P | |
14315 | M | M.PglR39ORFGP (71% identity) | M.Ran24876ORF14315P | |
14320 | 154 aa hypothetical protein | |||
15350 | 1043 aa hypothetical protein | |||
15355 | R | Psp3121IIIP (83% identity) | Ran24876ORF15390P | |
15360 | 3-deoxy-D-manno-octulosonic acid transferase | |||
15365 | S | restriction endonuclease subunit S | S1.Ran24876ORF15390P | |
15370 | S | DNA polymerase beta subunit | S2.Ran24876ORF15390P | |
15375 | 112 aa hypothetical protein | |||
15380 | MazF family transcriptional regulator | |||
15385 | 76 aa hypothetical protein | |||
15390 | M | M.ChuSJ1ORFCP (78% identity) | M.Ran24876ORF15390P | |
15395 | co-chaperone GroES | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
970 | C4-dicarboxylate ABC transporter permease | |||
975 | RM | AspJSORF198P (86% identity) | Ran24876ORF975P | |
980 | 346 aa hypothetical protein | |||
985 | 403 aa hypothetical protein | |||
990 | M | M.Psp59ORF2150P (78% identity) | M1.Ran24876ORF975P | |
995 | DNA-binding protein | |||
1000 | M | M.Dsp3050ORF1100P (77% identity) | M2.Ran24876ORF975P | |
1005 | 213 aa hypothetical protein | |||
2975 | 624 aa hypothetical protein | |||
2980 | M | M.Ocy1ORF10530P (64% identity) | M.Ran24876ORF2980P | |
2985 | R | Ocy1ORF10530P (70% identity) | Ran24876ORF2980P | |
2990 | 528 aa hypothetical protein | |||
3215 | type III pantothenate kinase | |||
3220 | M | M2.Dac909ORF310P (65% identity) | M.Ran24876ORF3220P | |
3225 | R | Asp3H11ORF9045P (72% identity) | Ran24876ORF3220P | |
3230 | amidohydrolase | |||
4850 | AAA family ATPase | |||
4855 | RM | Aca19327ORFGP (57% identity) | Ran24876ORF4855P | |
4860 | cytoplasmic protein | |||
7915 | 110 aa hypothetical protein | |||
??? | RM | PnaORF2899BP (28% identity) | Ran24876ORF7920P | |
7940 | nucleotidyltransferase | |||
9035 | 0 aa hypothetical protein | |||
9040 | RM | 347 aa hypothetical protein | Ran24876ORF9040CP | |
9045 | RM | 227 aa hypothetical protein | Ran24876ORF9040BP | |
9050 | RM | 104 aa hypothetical protein | Ran24876ORF9040AP | |
9055 | 3-hydroxybutyrate dehydrogenase | |||
9205 | abortive phage resistance protein | |||
9210 | RM | 418 aa hypothetical protein | Ran24876ORF9210AP | |
9215 | RM | Pac1488ORF3145P (37% identity) | Ran24876ORF9210BP | |
9220 | 452 aa hypothetical protein | |||
9410 | ATP-dependent helicase | |||
9415 | RM | CbaAAWORFAP (75% identity) | Ran24876ORF9415P | |
9420 | phage antirepressor protein | |||
12785 | Crp/Fnr family transcriptional regulator | |||
12790 | RM | PglR39ORFEP (74% identity) | Ran24876ORF12790P | |
12795 | ABC transporter ATP-binding protein | |||
13300 | 90 aa hypothetical protein | |||
13305 | M | M.Aaq168ORF5415P (68% identity) | M.Ran24876ORF13305P | |
13310 | R | Bhi4161ORFAP (68% identity) | Ran24876ORF13305P | |
13315 | 60 aa hypothetical protein | |||
13445 | 113 aa hypothetical protein | |||
13450 | M | Rsp5965ORF14480P (48% identity) | M.Ran24876ORF13450P | |
13455 | DNA repair protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2290 | lipoate--protein ligase | |||
2295 | R | Osp27CORF19760P (64% identity) | Ran24876ORF2310P | |
2300 | 226 aa hypothetical protein | |||
2305 | 287 aa hypothetical protein | |||
2310 | M | M.MspSC27I (68% identity) | M.Ran24876ORF2310P | |
2315 | DUF493 domain-containing protein | |||
2890 | 149 aa hypothetical protein | |||
2895 | M | M.MspMM1I (27% identity) | M.Ran24876ORF2895P | |
2900 | R | 1109 aa hypothetical protein | Ran24876ORF2895P | |
2905 | 403 aa hypothetical protein | |||
10085 | 116 aa hypothetical protein | |||
10090 | R | TimiMBLW1ORF28830P (60% identity) | Ran24876ORF10105P | |
10095 | death-on-curing protein | |||
10100 | DNA-binding protein | |||
10105 | M | M.Ssp11291ORF17885P (71% identity) | M.Ran24876ORF10105P | |
10110 | 261 aa hypothetical protein | |||
13035 | plasmid maintenance system killer | |||
13040 | R | Osp83ORF3875P (73% identity) | Ran24876ORF13040P | |
13045 | DNA ligase |