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Putative Helicobacter pylori MKM6 RM systems
Ref: Kojima,K.K. et al. Mol. Biol. Evol. 33 (11), 2848-2859 (2016)
REBASE ref # 23119
Complete sequence: 1,577,123 bp
GenBank #: AP017362
REBASE acronym: HpyMKM6
Org_num: 22630
All begin HPMKM6_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
460 | polyphosphate kinase | |||
461 | S | S.HpyT014ORF2315P (98% identity) | S.HpyMKM6ORF462P | |
462 | M | M.Hpyfe5ORF5065P (97% identity) | M.HpyMKM6ORF462P | |
??? | R | HpyUM085ORF90P (94% identity) | HpyMKM6ORF462P | |
465 | uncharacterized protein | |||
788 | outer membrane protein HofF | |||
789 | S | S1.HpyMKM6ORF849P (100% identity) | S1.HpyMKM6ORF789P | |
??? | S | S2.HpyMKM6ORF849P (100% identity) | S2.HpyMKM6ORF789P | |
791 | cadmium-transporting ATPase, P-type | |||
845 | hydroxyethylthiazole kinase | |||
846 | R | HpyTN2ORF5590P (97% identity) | HpyMKM6ORF849P | |
847 | S | S1.HpyMKM6ORF789P (100% identity) | S1.HpyMKM6ORF849P | |
??? | S | S2.HpyMKM6ORF789P (100% identity) | S2.HpyMKM6ORF849P | |
849 | M | M.Hpy78ORF536P (97% identity) | M.HpyMKM6ORF849P | |
850 | integral membrane protein | |||
1371 | DNA polymerase I | |||
1372 | S | S.HpyCHN10ORF7035P (64% identity) | S1.HpyMKM6ORF1372P | |
1373 | S | S.HpyUM084ORF1905P (25% identity) | S2.HpyMKM6ORF1372P | |
1374 | type II restriction modification enzyme | |||
1437 | FAD-dependent thymidylate synthase | |||
??? | S | S.HpyC104ORF3000P (57% identity) | S.HpyMKM6ORF1442P | |
1440 | uncharacterized protein | |||
1441 | uncharacterized protein | |||
1442 | M | M.Hpy23ORF1426P (97% identity) | M.HpyMKM6ORF1442P | |
??? | R | HpyJA101ORF7205P (97% identity) | HpyMKM6ORF1442P | |
1445 | phosphonate metabolism protein PhnI | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
50 | nicotinate-nucleotide pyrophosphorylase | |||
51 | RM | Hpy1838CORF530P (66% identity) | HpyMKM6ORF51AP | |
51 | RM | adenine specific DNA methyltransferase | HpyMKM6ORF51BP | |
??? | RM | Uncharacterized protein | HpyMKM6ORF51CP | |
52 | protease | |||
59 | terC family integral membrane protein | |||
60 | M | M.HpyJSHR3ORF2070P (88% identity) | CCTC | M1.HpyMKM6ORF60P |
??? | M | M2.HpyPF16ORF315P (99% identity) | CCTC | M2.HpyMKM6ORF60P |
63 | sodium/proline symporter | |||
147 | alpha-1,2-fucosyltransferase | |||
148 | M | M.HpyK045II (98% identity) | GATC | M.HpyMKM6ORF148P |
149 | R | HpyJF13ORF148P (95% identity) | GATC | HpyMKM6ORF148P |
150 | malonyl coenzyme A-acyl carrier protein | |||
287 | exodeoxyribonuclease VII large subunit | |||
288 | R | HpyPF16IVP (98% identity) | CCGG | HpyMKM6ORF289P |
289 | M | M.HpyF225ORFAP (100% identity) | CCGG | M.HpyMKM6ORF289P |
290 | ATP-dependent protease binding subunit | |||
375 | GTP-binding protein LepA | |||
376 | M | M.Hpyoh1ORF4535P (100% identity) | M.HpyMKM6ORF376P | |
377 | uncharacterized protein | |||
478 | outer membrane protein HopK | |||
479 | M | M.HpyP30ORFQP (99% identity) | ATTAAT | M.HpyMKM6ORF479P |
480 | type II adenine specific methyltransferase | |||
481 | GTP-binding protein TypA | |||
??? | M | M.Hpyfe85ORF4785P (94% identity) | ACNGT | M.HpyMKM6ORF482P |
485 | R | HpyJA114IIP (100% identity) | ACNGT | HpyMKM6ORF482P |
486 | DNA cytosine methyltransferase | |||
485 | type II restriction endonuclease | |||
486 | M | M.Hpyfe96ORF4835P (99% identity) | ACGT | M.HpyMKM6ORF486P |
487 | R | Hpyfe66ORF4755P (89% identity) | ACGT | HpyMKM6ORF486P |
488 | catalase-like protein | |||
505 | DNA gyrase subunit B | |||
506 | M | M.HpyM5CORFYP (99% identity) | GTAC | M.HpyMKM6ORF506P |
507 | R | Hpyfe93ORF3025P (98% identity) | GTAC | HpyMKM6ORF506P |
508 | outer membrane protein | |||
900 | flagellar hook protein FlgE | |||
901 | R | HpyGU1CORFQP (97% identity) | GTNNAC | HpyMKM6ORF902P |
902 | M | M.HpyK021VII (97% identity) | GTNNAC | M.HpyMKM6ORF902P |
903 | rep helicase, single-stranded DNA-dependent | |||
1033 | biotin carboxylase | |||
1034 | M | M.HpyMA05ORF5200P (99% identity) | M.HpyMKM6ORF1034P | |
??? | R | HpyF228ORFPP (100% identity) | HpyMKM6ORF1034P | |
1037 | laminin subunit alpha-2 precursor | |||
1066 | uncharacterized protein | |||
1067 | M | M.Hpy72ORF1073P (99% identity) | GCGC | M.HpyMKM6ORF1067P |
1068 | flgM protein | |||
1153 | haloacid dehalogenase-like hydrolase | |||
1154 | M | M.HpyOK316ORFCP (99% identity) | CATG | M.HpyMKM6ORF1154P |
1155 | iceA2 protein | |||
1373 | type IIS restriction enzyme protein | |||
1374 | RM | Hpy67ORF1398P (99% identity) | HpyMKM6ORF1374P | |
1375 | hP1473-transformation associated protein | |||
1400 | permease; membrane protein | |||
1401 | M | M1.HpyGU1CORFUP (100% identity) | CCATC | M1.HpyMKM6ORF1401P |
??? | M | M1.HpyJSHR6ORF310P (100% identity) | CCATC | M2.HpyMKM6ORF1401P |
??? | R | Hpy24ORF1399P (99% identity) | HpyMKM6ORF1401P | |
1406 | outer membrane protein | |||
1422 | uncharacterized protein | |||
1423 | RM | HpyOK306ORFIP (88% identity) | HpyMKM6ORF1423P | |
1424 | type III restriction enzyme R protein | |||
1462 | uncharacterized protein | |||
1463 | M | M.Hpyfe61ORF7600P (99% identity) | TGCA | M.HpyMKM6ORF1463P |
1464 | R | HpyM6CORFCP (98% identity) | TGCA | HpyMKM6ORF1463P |
1465 | uncharacterized protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
35 | rod shape-determining protein MreC | |||
36 | R | HpyP30ORFJP (98% identity) | HpyMKM6ORF37P | |
??? | M | M.HpyPE19ORF6555P (96% identity) | M.HpyMKM6ORF37P | |
40 | transcriptional regulator | |||
1303 | endonuclease | |||
1304 | M | M.Hpy154ORF6975P (97% identity) | M.HpyMKM6ORF1304P | |
1305 | R | HpySG07XIIIP (89% identity) | HpyMKM6ORF1304P | |
1306 | biotin synthase | |||
1423 | type IIG restriction-modification enzyme | |||
1424 | R | HpyJ019ORF7220P (97% identity) | HpyMKM6ORF1425P | |
??? | M | M.HpyF233ORFBP (89% identity) | M.HpyMKM6ORF1425P | |
1427 | ATP-dependent DNA helicase RecG |