Helicobacter pylori MKF10 |
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Putative Helicobacter pylori MKF10 RM systems
Ref: Kojima,K.K. et al. Mol. Biol. Evol. 33 (11), 2848-2859 (2016)
REBASE ref # 23119
Complete sequence: 1,617,765 bp
GenBank #: AP017356
REBASE acronym: HpyMKF10
Org_num: 22625
All begin HPMKF10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 500 | polyphosphate kinase | |||
| 501 | S | S.HpyOK302ORFTP (97% identity) | S.HpyMKF10ORF502P | |
| 502 | M | M.HpyOK306ORFVP (97% identity) | M.HpyMKF10ORF502P | |
| ??? | R | Hpyfe82ORF4855P (94% identity) | HpyMKF10ORF502P | |
| 506 | uncharacterized protein | |||
| 557 | modification methylase HaeIII | |||
| 558 | M | M.Hpy1829AORF5320P (97% identity) | M.HpyMKF10ORF558P | |
| 559 | S | S.HpyKH10ORFTP (89% identity) | S.HpyMKF10ORF558P | |
| 560 | R | HpyJSHR3ORF10540P (97% identity) | HpyMKF10ORF558P | |
| 561 | hydroxyethylthiazole kinase | |||
| 615 | cadmium-transporting ATPase, P-type | |||
| 616 | S | S.HpyX438ORFAP (68% identity) | S.HpyMKF10ORF616P | |
| 617 | hof-family outer membrane protein | |||
| 1470 | FAD-dependent thymidylate synthase | |||
| 1471 | S | S.Hpy5ORF15590P (96% identity) | S.HpyMKF10ORF1473P | |
| 1472 | uncharacterized protein | |||
| 1473 | M | M.HpyF20JORF1432P (97% identity) | M.HpyMKF10ORF1473P | |
| ??? | R | HpyF20JORF1432P (98% identity) | HpyMKF10ORF1473P | |
| 1476 | phosphonate metabolism protein PhnI | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 77 | adenine-specific DNA methylase | |||
| 78 | M | M1.Hpy35ORF20246P (100% identity) | GAAGA | M1.HpyMKF10ORF75P |
| 79 | M | M1.Hpyfe24ORF7090P (99% identity) | GAAGA | M2.HpyMKF10ORF75P |
| 80 | R | HpyJ021VP (98% identity) | GAAGA | HpyMKF10ORF75P |
| 81 | transcriptional regulator | |||
| 91 | nicotinate-nucleotide pyrophosphorylase | |||
| 92 | RM | HpyOK317ORFFP (93% identity) | HpyMKF10ORF92P | |
| 93 | adenine-specific DNA methyltransferase | |||
| 92 | adenine specific DNA methyltransferase | |||
| 93 | M | M.Hpyfe99ORF7240P (100% identity) | GANTC | M.HpyMKF10ORF93P |
| 94 | R | HpyK25VIIP (97% identity) | GANTC | HpyMKF10ORF93P |
| 95 | protease | |||
| 102 | terC family integral membrane protein | |||
| 103 | M | M.HpyJSHR3ORF2070P (99% identity) | CCTC | M1.HpyMKF10ORF103P |
| 104 | M | M2.HpyDU7AORFDP (98% identity) | CCTC | M2.HpyMKF10ORF103P |
| 105 | sodium/proline symporter | |||
| 188 | alpha-1,2-fucosyltransferase | |||
| 189 | M | M.HpyJA109VII (98% identity) | GATC | M.HpyMKF10ORF189P |
| 190 | R | HpyJA114VIIIP (95% identity) | GATC | HpyMKF10ORF189P |
| 191 | tetratricopeptide TPR_2 repeat protein | |||
| 324 | exodeoxyribonuclease VII large subunit | |||
| 325 | M | M.Hpy464ORF1300P (99% identity) | TCGA | M.HpyMKF10ORF325P |
| 326 | uncharacterized protein | |||
| 326 | uncharacterized protein | |||
| 327 | R | HpyJ029ORF1405P (100% identity) | CCGG | HpyMKF10ORF328P |
| 328 | M | M.HpyP90ORFAP (99% identity) | CCGG | M.HpyMKF10ORF328P |
| 329 | ATP-dependent protease binding subunit | |||
| 376 | polysaccharide deacetylase family protein | |||
| 377 | R | HpyK51ORF313P (99% identity) | CTNAG | HpyMKF10ORF378P |
| 378 | M | M.Hpy458ORFPP (99% identity) | CTNAG | M.HpyMKF10ORF378P |
| 379 | uncharacterized protein | |||
| 519 | outer membrane protein HopK | |||
| 520 | M | M.HpyJ022V (99% identity) | ATTAAT | M.HpyMKF10ORF520P |
| 521 | type II adenine specific methyltransferase | |||
| 522 | GTP-binding protein TypA | |||
| 523 | M | M.HpyK046ORF2270P (99% identity) | ACGT | M.HpyMKF10ORF523P |
| 524 | R | HpyF209ORF487P (99% identity) | ACGT | HpyMKF10ORF523P |
| 525 | catalase-like protein | |||
| 555 | phosphatidic acid phosphatase | |||
| 556 | R | HpyF234ORFJP (99% identity) | GGCC | HpyMKF10ORF557P |
| 557 | M | M.HpysHP34ORF6260P (100% identity) | GGCC | M.HpyMKF10ORF557P |
| 558 | type I restriction-modification system, M | |||
| 725 | outer membrane protein | |||
| ??? | RM | HpySG02ORF2950P (88% identity) | HpyMKF10ORF726P | |
| 730 | glycerol-3-phosphate dehydrogenase | |||
| 895 | m23/M37 family peptidase | |||
| 896 | R | HpyF210ORF900P (100% identity) | GTAC | HpyMKF10ORF897P |
| 897 | M | M.HpyF210ORF900P (99% identity) | GTAC | M.HpyMKF10ORF897P |
| 898 | DNA gyrase subunit B | |||
| 937 | flagellar hook protein FlgE | |||
| 938 | R | HpyOK95ORFRP (99% identity) | GTNNAC | HpyMKF10ORF939P |
| 939 | M | M.HpyF228ORF9880P (99% identity) | GTNNAC | M.HpyMKF10ORF939P |
| 940 | rep helicase, single-stranded DNA-dependent | |||
| 1060 | biotin carboxylase | |||
| 1061 | M | M.Hpyfe82ORF2040P (99% identity) | TCNNGA | M.HpyMKF10ORF1061P |
| 1062 | R | Hpyfe95ORF5540P (98% identity) | TCNNGA | HpyMKF10ORF1061P |
| 1063 | laminin subunit alpha-2 precursor | |||
| 1095 | uncharacterized protein | |||
| 1096 | M | M.HpyOK308ORFMP (99% identity) | GCGC | M.HpyMKF10ORF1096P |
| 1097 | flgM protein | |||
| 1180 | haloacid dehalogenase | |||
| 1181 | M | M.HpyGU82AORFFP (97% identity) | CATG | M.HpyMKF10ORF1181P |
| ??? | R | Hpy21ORF1158P (99% identity) | CATG | HpyMKF10ORF1181P |
| 1184 | serine O-acetyltransferase | |||
| 1402 | DNA polymerase I | |||
| 1403 | S | S.HpyK014ORF6800P (95% identity) | S.HpyMKF10ORF1404P | |
| 1404 | RM | HpyP76ORFIP (99% identity) | HpyMKF10ORF1404P | |
| 1405 | transformation associated protein | |||
| 1431 | permease; membrane protein | |||
| 1432 | M | M2.Hpyfe71ORF135P (100% identity) | CCATC | M1.HpyMKF10ORF1432P |
| 1433 | M | M2.HpySG04III (99% identity) | CCATC | M2.HpyMKF10ORF1432P |
| ??? | R | Hpy3401ORF310P (89% identity) | CCATC | HpyMKF10ORF1432P |
| 1436 | outer membrane protein HorK | |||
| 1453 | uncharacterized protein | |||
| 1454 | RM | Hpyfe7ORF50P (93% identity) | HpyMKF10ORF1454P | |
| 1455 | uncharacterized protein | |||
| 1492 | uncharacterized protein | |||
| 1493 | M | M.HpyOK303ORFIP (99% identity) | TGCA | M.HpyMKF10ORF1493P |
| 1494 | R | HpyF75ORF1530P (98% identity) | TGCA | HpyMKF10ORF1493P |
| 1495 | 63 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 75 | rod shape-determining protein MreC | |||
| 76 | R | Hpy90ORF35P (99% identity) | HpyMKF10ORF77P | |
| 77 | M | M.HpyF235ORFEP (99% identity) | M.HpyMKF10ORF77P | |
| 78 | type IIS restriction enzyme M2 protein | |||
| 1333 | type II citrate synthase | |||
| 1334 | M | M.HpyF209ORF1309P (97% identity) | M.HpyMKF10ORF1334P | |
| 1335 | R | HpyJA104ORF320P (92% identity) | HpyMKF10ORF1334P | |
| 1336 | biotin synthase | |||
| 1456 | uncharacterized protein | |||
| 1457 | R | HpyOK34ORFHP (96% identity) | HpyMKF10ORF1458P | |
| ??? | M | M.HpyJ026ORF7140P (97% identity) | M.HpyMKF10ORF1458P | |
| 1460 | ATP-dependent DNA helicase RecG | |||