Helicobacter pylori F51 |
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Putative Helicobacter pylori F51 RM systems
Ref: Kojima,K.K. et al. Mol. Biol. Evol. 33 (11), 2848-2859 (2016)
REBASE ref # 23119
Complete sequence: 1,575,499 bp
GenBank #: AP017343
REBASE acronym: HpyK51
Org_num: 22615
All begin HPF51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 434 | polyphosphate kinase | |||
| 435 | S | S.HpyP30ORFPP (99% identity) | S.HpyK51ORF436P | |
| 436 | M | M.HpyJ021ORF2305P (96% identity) | M.HpyK51ORF436P | |
| 437 | R | HpyK009IXP (92% identity) | HpyK51ORF436P | |
| 438 | uncharacterized protein | |||
| 772 | outer membrane protein HofF | |||
| 773 | S | S.HpyTN2ORF6170P (97% identity) | S.HpyK51ORF773P | |
| 774 | cadmium-transporting ATPase, P-type | |||
| 828 | hydroxyethylthiazole kinase | |||
| 829 | R | Hpy23ORF730P (91% identity) | HpyK51ORF833P | |
| 830 | S | anti-codon nuclease masking agent | S.HpyK51ORF833P | |
| 832 | uncharacterized protein | |||
| 833 | M | M.HpyP82ORFGP (84% identity) | M.HpyK51ORF833P | |
| 834 | modification methylase HaeIII | |||
| 1422 | FAD-dependent thymidylate synthase | |||
| 1423 | S | S.Hpy39ORFOP (90% identity) | S.HpyK51ORF1425P | |
| 1424 | uncharacterized protein | |||
| 1425 | M | M.HpyOK34ORFIP (97% identity) | M.HpyK51ORF1425P | |
| ??? | R | HpyTN2ORF14720P (96% identity) | HpyK51ORF1425P | |
| 1428 | phosphonate metabolism protein PhnI | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | nicotinate-nucleotide pyrophosphorylase | |||
| ??? | RM | HpyPE138ORF6770P (85% identity) | HpyK51ORF46P | |
| 49 | protease | |||
| 56 | terC family integral membrane protein | |||
| 57 | M | M2.HpyF225ORFZP (94% identity) | CCTC | M1.HpyK51ORF57P |
| 58 | M | M2.HpyK041VIIP (98% identity) | CCTC | M2.HpyK51ORF57P |
| 59 | R | HpyFD506ORFXP (92% identity) | CCTC | HpyK51ORF57P |
| 60 | adenine methyltransferase | |||
| 59 | restriction endonuclease | |||
| 60 | M | M.Hpyfe32ORF6935P (99% identity) | GTSAC | M.HpyK51ORF60P |
| 61 | R | Hpy192ORFCP (99% identity) | GTSAC | HpyK51ORF60P |
| 62 | adenine/cytosine DNA methyltransferase | |||
| 61 | type II restriction enzyme | |||
| 62 | M | adenine/cytosine DNA methyltransferase | CCTTC | M.HpyK51ORF62P |
| 63 | sodium/proline symporter | |||
| 94 | malonyl coenzyme A-acyl carrier protein | |||
| 95 | R | HpyJ009VIIP (94% identity) | GATC | HpyK51ORF96P |
| 96 | M | M.HpyK007II (99% identity) | GATC | M.HpyK51ORF96P |
| 97 | alpha-1,2-fucosyltransferase | |||
| 259 | exodeoxyribonuclease VII large subunit | |||
| 260 | M | M.HpyMKF10ORF325P (99% identity) | TCGA | M.HpyK51ORF260P |
| 261 | uncharacterized protein | |||
| ??? | R | HpyF210ORF310P (92% identity) | HpyK51ORF260P | |
| 264 | adenine-specific DNA methyltransferase | |||
| ??? | hypothetical protein | |||
| 264 | M | M.HpyP90ORFAP (100% identity) | CCGG | M.HpyK51ORF264P |
| 265 | ATP-dependent protease binding subunit | |||
| 311 | polysaccharide deacetylase family protein | |||
| 312 | R | HpyGU71CORFTP (100% identity) | CTNAG | HpyK51ORF313P |
| 313 | M | M.HpyP30ORFOP (99% identity) | CTNAG | M.HpyK51ORF313P |
| 314 | uncharacterized protein | |||
| 351 | GTP-binding protein LepA | |||
| 352 | M | M.Hpyfe123ORF5560P (99% identity) | M.HpyK51ORF352P | |
| 353 | uncharacterized protein | |||
| 451 | outer membrane protein | |||
| 452 | M | M.HpyJ022V (99% identity) | ATTAAT | M.HpyK51ORF452P |
| 453 | type II adenine specific methyltransferase | |||
| 454 | GTP-binding protein TypA | |||
| 455 | M | M.HpyV002II (99% identity) | ACNGT | M.HpyK51ORF455P |
| 456 | R | HpyK014IIP (100% identity) | ACNGT | HpyK51ORF455P |
| 457 | catalase-like protein | |||
| 473 | DNA gyrase subunit B | |||
| 474 | M | M.Hpy28ORF507P (99% identity) | GTAC | M.HpyK51ORF474P |
| ??? | R | HpyGU62AORFRP (97% identity) | HpyK51ORF474P | |
| 478 | outer membrane protein | |||
| 609 | glycerol-3-phosphate dehydrogenase | |||
| 610 | RM | HpyTW22ORF3320P (93% identity) | HpyK51ORF610P | |
| 611 | uncharacterized protein | |||
| 833 | type I restriction-modification system, M | |||
| 834 | M | M.HpyP98ORFGP (100% identity) | M.HpyK51ORF834P | |
| 835 | R | HpySG12ORF2545P (98% identity) | HpyK51ORF834P | |
| 836 | integral membrane protein | |||
| 888 | flagellar hook protein FlgE | |||
| 889 | R | HpyJA106XIP (97% identity) | GTNNAC | HpyK51ORF890P |
| 890 | M | M.HpyK25IX (96% identity) | GTNNAC | M.HpyK51ORF890P |
| 891 | rep helicase, single-stranded DNA-dependent | |||
| 1015 | biotin carboxylase | |||
| 1016 | M | M.Hpyfe88ORF2055P (100% identity) | TCNNGA | M.HpyK51ORF1016P |
| 1017 | R | Hpyfe85ORF2060P (100% identity) | TCNNGA | HpyK51ORF1016P |
| 1018 | laminin subunit alpha-2 precursor | |||
| 1048 | uncharacterized protein | |||
| 1049 | M | M.HpyK28XIII (98% identity) | GCGC | M.HpyK51ORF1049P |
| 1050 | flgM protein | |||
| 1134 | haloacid dehalogenase-like hydrolase | |||
| 1135 | M | M.HpySG12I (99% identity) | CATG | M.HpyK51ORF1135P |
| ??? | R | Hpyfe8ORF5510P (94% identity) | HpyK51ORF1135P | |
| 1138 | serine O-acetyltransferase | |||
| 1358 | DNA polymerase I | |||
| 1359 | S | S2.HpySG13ORF6805P (98% identity) | S1.HpyK51ORF1361P | |
| 1360 | S | S1.HpyCA15ORF585P (96% identity) | S2.HpyK51ORF1361P | |
| 1361 | RM | HpyDU7AORFPP (99% identity) | HpyK51ORF1361P | |
| 1362 | hP1473-transformation associated protein | |||
| 1404 | transcription elongation factor NusA | |||
| 1405 | RM | HpyP96ORFBP (93% identity) | HpyK51ORF1405P | |
| 1406 | uncharacterized protein | |||
| 1447 | uncharacterized protein | |||
| 1448 | M | M.HpyML1ORFGP (99% identity) | TGCA | M.HpyK51ORF1448P |
| 1449 | R | HpyOK303ORFIP (99% identity) | TGCA | HpyK51ORF1448P |
| 1450 | site-specific DNA-methyltransferase | |||
| 1449 | type II restriction enzyme | |||
| 1450 | M | M.HpyOK88ORFIP (100% identity) | M.HpyK51ORF1450P | |
| 1451 | uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1291 | multidrug resistance protein | |||
| 1292 | M | M.HpyCHN8ORF6790P (98% identity) | M.HpyK51ORF1292P | |
| 1293 | R | Hpyfe96ORF675P (92% identity) | HpyK51ORF1292P | |
| 1294 | biotin synthase | |||
| 1408 | uncharacterized protein | |||
| 1409 | R | HpyJ016ORF7305P (98% identity) | HpyK51ORF1410P | |
| ??? | M | M.HpyOK68ORFFP (95% identity) | M.HpyK51ORF1410P | |
| 1412 | ATP-dependent DNA helicase RecG | |||