Helicobacter pylori F211 |
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Putative Helicobacter pylori F211 RM systems
Ref: Kojima,K.K. et al. Mol. Biol. Evol. 33 (11), 2848-2859 (2016)
REBASE ref # 23119
Complete sequence: 1,585,641 bp
GenBank #: AP017335
REBASE acronym: HpyF211
Org_num: 22609
All begin HPF211_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 457 | polyphosphate kinase | |||
| 458 | S | S.HpyT004XIV (98% identity) | S.HpyF211ORF459P | |
| ??? | M | M.Hpy72ORF468P (99% identity) | M.HpyF211ORF459P | |
| ??? | R | HpyJF13ORF467P (79% identity) | HpyF211ORF459P | |
| 462 | type I restriction enzyme R protein | |||
| 518 | integral membrane protein | |||
| ??? | M | M.Hpy90ORF872P (98% identity) | M.HpyF211ORF519P | |
| 521 | S | S.HpyF211ORF578P (48% identity) | S.HpyF211ORF519P | |
| 522 | R | HpyMKM5ORF529P (98% identity) | HpyF211ORF519P | |
| 523 | hydroxyethylthiazole kinase | |||
| 577 | cadmium-transporting ATPase, P-type | |||
| 578 | S | S.HpyCA10ORF2865P (65% identity) | S.HpyF211ORF578P | |
| 579 | R | type I site-specific deoxyribonuclease | HpyF211ORF578P | |
| 580 | outer membrane protein HofF | |||
| 1440 | FAD-dependent thymidylate synthase | |||
| 1441 | S | S.HpyJA106ORF7240P (96% identity) | S.HpyF211ORF1443P | |
| 1442 | uncharacterized protein | |||
| 1443 | M | M.HpyJF13ORF1463P (99% identity) | M.HpyF211ORF1443P | |
| ??? | R | Hpy90ORF1463P (98% identity) | HpyF211ORF1443P | |
| 1446 | phosphonate metabolism protein PhnI | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 45 | nicotinate-nucleotide pyrophosphorylase | |||
| 46 | RM | HpyF18KORF46P (91% identity) | HpyF211ORF46P | |
| 47 | adenine-specific DNA methyltransferase | |||
| 46 | adenine specific DNA methyltransferase | |||
| 47 | M | M.Hpyfe22ORF7025P (99% identity) | GANTC | M.HpyF211ORF47P |
| 48 | R | HpyF233ORFIP (100% identity) | GANTC | HpyF211ORF47P |
| 49 | protease | |||
| 56 | terC family integral membrane protein | |||
| 57 | M | M2.HpyF225ORFZP (97% identity) | CCTC | M1.HpyF211ORF57P |
| 58 | M | M2.HpyF233ORFFP (100% identity) | CCTC | M2.HpyF211ORF57P |
| 59 | R | Hpy90ORF61P (99% identity) | CCTC | HpyF211ORF57P |
| 60 | uncharacterized protein | |||
| 60 | uncharacterized protein | |||
| 61 | M | M.HpyJF13ORF63P (100% identity) | GTSAC | M.HpyF211ORF61P |
| ??? | R | Hpyfe63ORF7595P (100% identity) | GTSAC | HpyF211ORF61P |
| 63 | adenine/cytosine DNA methyltransferase | |||
| 142 | alpha-1,2-fucosyltransferase | |||
| 143 | M | M.HpyK99ORFRP (97% identity) | GATC | M.HpyF211ORF143P |
| ??? | R | HpyJF13ORF148P (99% identity) | GTAC | HpyF211ORF143P |
| 146 | tetratricopeptide TPR_2 repeat protein | |||
| 284 | exodeoxyribonuclease VII large subunit | |||
| 285 | M | M.Hpy90ORF294P (100% identity) | TCGA | M.HpyF211ORF285P |
| 286 | uncharacterized protein | |||
| 287 | R | HpyPF16IVP (96% identity) | CCGG | HpyF211ORF285P |
| 288 | adenine-specific DNA methyltransferase | |||
| 287 | type II DNA modification enzyme | |||
| 288 | M | M.HpyUM077ORF765P (99% identity) | CCGG | M.HpyF211ORF288P |
| 289 | ATP-dependent protease binding subunit | |||
| 335 | polysaccharide deacetylase family protein | |||
| 336 | R | HpyJ015VIIP (100% identity) | CTNAG | HpyF211ORF337P |
| 337 | M | M.HpyJF13ORF342P (100% identity) | CTNAG | M.HpyF211ORF337P |
| 338 | uncharacterized protein | |||
| 479 | outer membrane protein | |||
| 480 | M | M.HpyK008II (98% identity) | ATTAAT | M.HpyF211ORF480P |
| 481 | type II adenine specific methyltransferase | |||
| 482 | GTP-binding protein TypA | |||
| ??? | M | M.HpyTN2ORF5220P (99% identity) | ACNGT | M.HpyF211ORF483P |
| 485 | R | HpyTN2ORF5220P (100% identity) | ACNGT | HpyF211ORF483P |
| 486 | uncharacterized protein | |||
| 709 | type IIG restriction-modification enzyme | |||
| 710 | RM | Hpy55ORF681P (87% identity) | HpyF211ORF710P | |
| 711 | glycerol-3-phosphate dehydrogenase | |||
| 907 | flagellar hook protein FlgE | |||
| 908 | R | HpyF225ORFPP (100% identity) | GTNNAC | HpyF211ORF909P |
| 909 | M | M.HpyF94ORF346P (98% identity) | GTNNAC | M.HpyF211ORF909P |
| 910 | rep helicase, single-stranded DNA-dependent | |||
| 1046 | biotin carboxylase | |||
| 1047 | M | M.Hpyfe92ORF2245P (99% identity) | TCNNGA | M.HpyF211ORF1047P |
| 1048 | R | Hpyfe8ORF4870P (100% identity) | TCNNGA | HpyF211ORF1047P |
| 1049 | laminin subunit alpha-2 precursor | |||
| 1079 | uncharacterized protein | |||
| 1080 | M | M.HpyMKM5ORF1090P (97% identity) | GCGC | M.HpyF211ORF1080P |
| 1081 | flgM protein | |||
| 1161 | haloacid dehalogenase-like hydrolase | |||
| 1162 | M | M.Hpy90ORF1181P (99% identity) | CATG | M.HpyF211ORF1162P |
| ??? | R | Hpy67ORF1175P (98% identity) | HpyF211ORF1162P | |
| 1165 | serine O-acetyltransferase | |||
| 1325 | lipopolysaccharide 1,2-glucosyltransferase RfaJ | |||
| 1326 | R | HpyJF13ORF1350P (98% identity) | HpyF211ORF1327P | |
| 1327 | M | M.Hpyfe24ORF555P (99% identity) | M.HpyF211ORF1327P | |
| 1328 | uncharacterized protein | |||
| 1380 | DNA polymerase I | |||
| 1381 | S | S.HpyJ022ORF6890P (96% identity) | S.HpyF211ORF1382P | |
| 1382 | RM | HpyJF13ORF1404P (99% identity) | HpyF211ORF1382P | |
| 1383 | hP1473-transformation associated protein | |||
| 1425 | uncharacterized protein | |||
| 1426 | RM | HpyF226ORFDP (96% identity) | HpyF211ORF1426P | |
| 1427 | uncharacterized protein | |||
| 1462 | uncharacterized protein | |||
| 1463 | M | M.HpySG07XI (99% identity) | TGCA | M.HpyF211ORF1463P |
| 1464 | R | HpyF233ORFCP (99% identity) | TGCA | HpyF211ORF1463P |
| 1465 | uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 32 | rod shape-determining protein MreC | |||
| 33 | R | Hpy90ORF35P (99% identity) | HpyF211ORF34P | |
| 34 | M | M.HpyF235ORFEP (98% identity) | M.HpyF211ORF34P | |
| 35 | transcriptional regulator | |||
| 1313 | endonuclease | |||
| 1314 | M | M.HpyOK68ORFCP (97% identity) | M.HpyF211ORF1314P | |
| 1315 | R | Hpy67ORF1328P (99% identity) | HpyF211ORF1314P | |
| 1316 | biotin synthase | |||
| 1427 | uncharacterized protein | |||
| 1428 | R | HpyF235ORFYP (99% identity) | HpyF211ORF1429P | |
| 1429 | M | M.Hpy458ORFIP (96% identity) | M.HpyF211ORF1429P | |
| 1430 | ATP-dependent DNA helicase RecG | |||