Ref: Ishikawa,J. et al. Proc. Natl. Acad. Sci. U.S.A. 101, 14925-14930 (2004)

REBASE ref # 8742

Sequence length:GenBank #:
chromosome: 6,021,225 bp AP006618 (NC_006361)
plasmid pNF1: 184,026 bp AP006619 (NC_006362)
plasmid pNF2: 87,093 bp AP006620 (NC_006363)

REBASE acronym: Nfa

Org_num: 4005

 

All begin NFA_, PNF1_, PNF2_

Type I
ORF Gene Most similar Specificity Name
 
chromosome
 
20580 transposase
20590 M M.MspL5ORF5998P (40% identity) M.NfaORF20590P
20600 176 aa hypothetical protein
 
27600 hydrolase
27610 M M.Rrh630II (96% identity) M.NfaORF27610P
27620 S S.Rho346ORF1190P (46% identity) S.NfaORF27610P
27630 putative
27640 441 aa hypothetical protein
27650 R Nfa33949ORF28P (99% identity) NfaORF27610P
27660 glycosyl hydrolase
 
28690 475 aa hypothetical protein
28700 R restriction-modification system NfaORF28700P
28710 transposase
Type II
ORF Gene Most similar Specificity Name
 
chromosome
 
2320 218 aa hypothetical protein
2330 V V.Rrh630ORF4853P (100% identity) V.NfaORF2340P
2340 M M.NfaW6977ORF16235P (99% identity) M.NfaORF2340P
2350 189 aa hypothetical protein
 
16200 230 aa hypothetical protein
16210 M M.Nfa33949I (99% identity) ATCGAT M.NfaORF16210P
16220 transcriptional regulator
 
40320 75 aa hypothetical protein
40330 M M.MsmGORFAP (45% identity) GATC M.NfaORF40330P
40340 85 aa hypothetical protein
 
40360 268 aa hypothetical protein
40370 M M.Ssp891hORF29550P (65% identity) M.NfaORF40370P
40380 136 aa hypothetical protein
 
44430 556 aa hypothetical protein
44440 M M.MphHY01ORF10600P (75% identity) M.NfaORF44440P
44450 helicase
 
plasmid pNF1
 
90 356 aa hypothetical protein
100 M M.Nfa1509ORF29690P (99% identity) M.NfaORF1100P
110 226 aa hypothetical protein
 
plasmid pNF2
 
210 recombinase
220 RM Nsp372ORF29755P (100% identity) NfaORF2220P
230 42 aa hypothetical protein
 
740 285 aa hypothetical protein
750 M M.Nsp372ORF29575P (100% identity) M.NfaORF2750P
760 71 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
chromosome
 
27620 restriction-modification system
27630 R Rrh630MrrP (98% identity) NfaMrrP
27640 441 aa hypothetical protein