Campylobacter jejuni HF5-4A-4 |
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Putative Campylobacter jejuni HF5-4A-4 RM systems
Ref: Timms,A.R. unpublished
REBASE ref # 23740
Complete sequence: 1,821,520 bp
GenBank #: CP007188
REBASE acronym: Cje54A4
Org_num: 22532
All begin AD53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5730 | thiamine biosynthesis protein | |||
| 5735 | S | S.Cje6891ORF6230P (100% identity) | S.Cje54A4ORF5750P | |
| 5740 | 233 aa hypothetical protein | |||
| ??? | hypothetical protein | |||
| 5745 | 354 aa hypothetical protein | |||
| 5750 | M | M.Cje10927ORF10180P (100% identity) | M.Cje54A4ORF5750P | |
| 5755 | succinyl-diaminopimelate desuccinylase | |||
| 8755 | alcohol dehydrogenase | |||
| 8760 | R | Csp9ORF7895P (100% identity) | GCANNNNNRTTA | Cje54A4ORF8780P |
| 8765 | ATP-binding protein | |||
| 8770 | S | S.Csp9ORF7895P (100% identity) | GCANNNNNRTTA | S.Cje54A4ORF8780P |
| 8775 | transcriptional regulator | |||
| 8780 | M | M1.Csp93259ORF7950P (100% identity) | GCANNNNNRTTA | M.Cje54A4ORF8780P |
| 8785 | NADH-flavin reductase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 180 | 97 aa hypothetical protein | |||
| 185 | RM | Cje065ORF175P (99% identity) | Cje54A4ORF185P | |
| 190 | Uncharacterized protein | |||
| 730 | 95 aa hypothetical protein | |||
| 735 | M | M.CjeC13265ORF90P (100% identity) | M.Cje54A4ORF9670P | |
| 740 | virion morphogenesis protein | |||
| 1300 | translation initiation factor IF-3 | |||
| 1305 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.Cje54A4ORF1305P |
| 1310 | 106 aa hypothetical protein | |||
| 3940 | acetate kinase | |||
| 3945 | RM | Cje65307ORF5795P (99% identity) | Cje54A4ORF3945P | |
| 3950 | membrane protein | |||
| 5765 | NAD-dependent deacetylase | |||
| 5770 | RM | Cje65341ORF6955P (99% identity) | Cje54A4ORF5770P | |
| 5775 | DNA strand exchange inhibitor protein | |||
| 6150 | phage tail protein | |||
| 6155 | M | M.CjeC13265ORF16P (100% identity) | M.Cje54A4ORF6155P | |
| 6160 | 95 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1915 | ipid-A-disaccharide synthase | |||
| 1920 | R | Csp93256ORF1410P (100% identity) | Cje54A4ORF1930P | |
| 1925 | 245 aa hypothetical protein | |||
| 1930 | M | M.Csp93256ORF1410P (100% identity) | M.Cje54A4ORF1930P | |
| 1935 | lipid-A-disaccharide synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 695 | ribosome maturation protein RimP | |||
| 700 | R | Csp6461McrBP (99% identity) | Cje54A4McrBP | |
| 705 | R | Csp7460McrCP (70% identity) | Cje54A4McrCP | |
| 710 | 562 aa hypothetical protein | |||