Corynebacterium phocae M408/89/1 |
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Putative Corynebacterium phocae M408/89/1 RM systems
Ref: Ruckert,C. et al. unpublished
REBASE ref # 23731
Complete sequence: 2,779,609 bp
GenBank #: CP009249
REBASE acronym: Cph44612
Org_num: 22515
All begin CPHO_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 485 | 675 aa hypothetical protein | |||
| ??? | M | M.CglG2ORF3540P (33% identity) | M.Cph44612ORFAP | |
| 495 | S | S.Cco44184ORF1646P (33% identity) | S.Cph44612ORFAP | |
| 500 | R | Cte44614ORF6750P (61% identity) | Cph44612ORFAP | |
| 505 | 147 aa hypothetical protein | |||
| 3940 | 975 aa hypothetical protein | |||
| ??? | S | S2.BbaNSORF568P (19% identity) | S.Cph44612ORF3945P | |
| 3950 | 314 aa hypothetical protein | |||
| 11760 | 23S rRNA pseudouridylate synthase | |||
| 11765 | M | restriction endonuclease, M subunit | M.Cph44612ORF11765P | |
| 11775 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 585 | peptidase M13 | |||
| 590 | R | Cst108ORF3670P (64% identity) | Cph44612ORF595P | |
| 595 | M | M.Cst108ORF3670P (48% identity) | M.Cph44612ORF595P | |
| 600 | alpha/beta hydrolase | |||
| 940 | 197 aa hypothetical protein | |||
| 945 | M | M.CspZJ599ORF4460P (76% identity) | M.Cph44612ORF945P | |
| 950 | sulfate permease | |||
| 2875 | 144 aa hypothetical protein | |||
| 2880 | M | M.CglAR1ORF1905P (46% identity) | M.Cph44612ORF2880P | |
| 2885 | proline iminopeptidase | |||
| 3290 | 301 aa hypothetical protein | |||
| 3295 | M | M.LceAORFBP (54% identity) | M.Cph44612ORF3295P | |
| 3300 | excinuclease ABC subunit C | |||
| 3365 | lysine transporter LysE | |||
| 3370 | R | Cau700975IIP (41% identity) | Cph44612ORF3375P | |
| 3375 | M | M.CspZJ599ORF8790P (73% identity) | M.Cph44612ORF3375P | |
| 3380 | 30S ribosomal protein S20 | |||
| 6745 | 60 aa hypothetical protein | |||
| 6750 | RM | Cst1197ORF8530P (62% identity) | Cph44612ORF6750P | |
| 6755 | 361 aa hypothetical protein | |||
| 7135 | 128 aa hypothetical protein | |||
| 7140 | M | M.Csp917ORF6995P (37% identity) | M1.Cph44612ORF7140P | |
| 7145 | M | M.Cmi1196ORF12065P (32% identity) | M2.Cph44612ORF7140P | |
| 7150 | 92 aa hypothetical protein | |||
| 10215 | phosphoglucosamine mutase | |||
| 10220 | R | Tpy800ORF6075P (64% identity) | Cph44612ORF10225P | |
| 10225 | M | M.Cgl1191ORF11850P (62% identity) | M.Cph44612ORF10225P | |
| 10230 | 30S ribosomal protein S9 | |||
| 11220 | helicase | |||
| 11225 | RM | Cfa1493ORF5835P (49% identity) | Cph44612ORF11225P | |
| 11230 | Uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6275 | 70 aa hypothetical protein | |||
| 6280 | M | M.Csp7794ORF2234P (61% identity) | M.Cph44612ORF6280P | |
| 6285 | feruloyl esterase | |||
| 8970 | pseudogene | |||
| 8975 | R | Cfa1495ORF12030P (74% identity) | Cph44612ORF8980P | |
| 8980 | M | DNA methylase | M1.Cph44612ORF8980P | |
| 8985 | M | M.CspZJ599ORF3770P (58% identity) | M2.Cph44612ORF8980P | |
| 8990 | transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 360 | iron transporter | |||
| ??? | R | Cst1961McrBP (41% identity) | Cph44612McrBP | |
| 370 | R | Che8McrCP (32% identity) | Cph44612McrCP | |
| 375 | 116 aa hypothetical protein | |||