Salmonella enterica subsp. enterica serovar Typhimurium RM10961 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium RM10961 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 23631
Complete sequence: 4,856,460 bp
GenBank #: CP013702
REBASE acronym: Sen10961
Org_num: 22066
All begin SEETMRM10961_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23210 | 110 aa hypothetical protein | |||
| ??? | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10961ORF23220P |
| 23220 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen10961ORF23220P |
| 23225 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10961ORF23220P |
| 23230 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1625 | Phage EaA protein | |||
| 1630 | M | M.Ssp15303ORFAP (100% identity) | M.Sen10961ORF1630P | |
| 1635 | Phage protein | |||
| 10245 | Permease of the drug and metabolite transporter | |||
| 10250 | V | Very-short-patch mismatch repair endonuclease | V.Sen10961DcmP | |
| 10255 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10961DcmP |
| 10260 | metal-dependent phosphohydrolase | |||
| 10495 | Phage-related protein | |||
| 10500 | M | M.StyUK1V (100% identity) | GATC | M.Sen10961ORF10500P |
| 10505 | Primosomal protein I | |||
| 17500 | DNA-binding protein Fis | |||
| 17505 | M | Adenine-specific methyltransferase | ATGCAT | M.Sen10961ORF17505P |
| 17510 | 54 aa hypothetical protein | |||
| 17960 | Ribulose-phosphate 3-epimerase | |||
| 17965 | M | Methyl-directed repair DNA adenine methylase | GATC | M.Sen10961DamP |
| 17970 | DamX, an inner membrane protein involved in bile | |||
| 23035 | putrescine transport system ATPase component | |||
| 23040 | RM | StyUK1IV (100% identity) | GATCAG | Sen10961ORF23040P |
| 23045 | ATPase-like protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2050 | metabolite transport protein | |||
| 2055 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10961ORF2055P |
| 2060 | R | StyUK1IP (99% identity) | CAGAG | Sen10961ORF2055P |
| 2065 | Cytochrome bd2, subunit I | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23225 | Type I restriction-modification system, | |||
| 23230 | R | StyUK1MrrP (100% identity) | Sen10961MrrP | |
| 23235 | 95 aa hypothetical protein | |||