Pseudomonas syringae pv. actinidiae NZ-47 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas syringae pv. actinidiae NZ-47 RM systems
Ref: Colombi,E. et al. unpublished
REBASE ref # 23597
| Sequence length: | GenBank #: | |
| Chromosome: | 6,545,910 bp | CP017009 |
| plasmid pPsa22180b: | 55,944 bp | CP017011 |
REBASE acronym: PsyNZ47
Org_num: 22002
All begin PsaNZ47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20 | DNA gyrase subunit B | |||
| 25 | M | M.PsyQSY6ORFBP (100% identity) | AGCANNNNNGTC | M.PsyNZ47ORF25P |
| ??? | S | S.PsyQSY6ORFBP (100% identity) | AGCANNNNNGTC | S.PsyNZ47ORF25P |
| 35 | R | PsyQSY6ORFBP (100% identity) | AGCANNNNNGTC | PsyNZ47ORF25P |
| 40 | 428 aa hypothetical protein | |||
| 140 | transposase | |||
| 145 | M | M.PsyQSY6ORF29P (100% identity) | M.PsyNZ47ORF130P | |
| 150 | S | S1.PsyYXH1ORFAP (100% identity) | S.PsyNZ47ORF130P | |
| 155 | R | PsyYXH1ORFAP (100% identity) | PsyNZ47ORF130P | |
| 160 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 850 | magnesium chelatase | |||
| 855 | M | M.PsyYXH1ORFFP (100% identity) | CTCGAG | M.PsyNZ47ORF855P |
| 860 | 236 aa hypothetical protein | |||
| 865 | R | PsyYXH1ORFFP (100% identity) | CTCGAG | PsyNZ47ORF855P |
| 870 | magnesium chelatase | |||
| 5195 | transposase | |||
| ??? | RM | PsyQSY6ORFEP (100% identity) | PsyNZ47ORFAP | |
| 5215 | ATP-dependent helicase | |||
| plasmid pPsa22180b | ||||
| 29920 | 145 aa hypothetical protein | |||
| 29925 | M | M.Psy126ORF27795P (99% identity) | M.PsyNZ47ORF29925P | |
| 29930 | 108 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8535 | membrane-associated oxidoreductase | |||
| 8540 | M | M.PsyYXH1ORFCP (100% identity) | M.PsyNZ47ORF8540P | |
| 8545 | 256 aa hypothetical protein | |||
| 8550 | R | PsyYXH1ORFCP (100% identity) | PsyNZ47ORF8540P | |
| 8555 | 100 aa hypothetical protein | |||