Lactobacillus delbrueckii subsp. indicus JCM 15610 |
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Putative Lactobacillus delbrueckii subsp. indicus JCM 15610 RM systems
Ref: Lee,G.-W. and Yi,H. unpublished
REBASE ref # 23501
| Sequence length: | GenBank #: | |
| Chromosome: | 1,967,220 bp | CP018614 |
| plasmid pLD01: | 41,771 bp | CP018612 |
| plasmid pLD02: | 12,870 bp | CP018613 |
REBASE acronym: Lde15610
Org_num: 22027
All begin LI610_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5600 | N-6 DNA methylase | |||
| 5605 | R | LdesunORF5560P (97% identity) | Lde15610ORF5610P | |
| 5610 | M | M.LdesunORF5560P (96% identity) | M.Lde15610ORF5610P | |
| 5615 | S | S1.LheLH10ORF3375P (31% identity) | S.Lde15610ORF5610P | |
| 5620 | 104 aa hypothetical protein | |||
| 6215 | 302 aa hypothetical protein | |||
| 6220 | S | S3.Lde15610ORF135P (95% identity) | S1.Lde15610ORF6245P | |
| 6225 | site-specific integrase | |||
| 6230 | S | S2.Lde15610ORF135P (100% identity) | S2.Lde15610ORF6245P | |
| 6235 | 39 aa hypothetical protein | |||
| 6240 | S | S1.Lde15610ORF135P (95% identity) | S3.Lde15610ORF6245P | |
| 6245 | M | M.Lde15610ORF135P (100% identity) | M.Lde15610ORF6245P | |
| 6250 | R | Lde15610ORF135P (100% identity) | Lde15610ORF6245P | |
| 6255 | oxidoreductase | |||
| plasmid pLD01 | ||||
| 105 | 302 aa hypothetical protein | |||
| 110 | S | S3.Lde15610ORF6245P (95% identity) | S1.Lde15610ORF135P | |
| 115 | 39 aa hypothetical protein | |||
| 120 | S | S2.Lde15610ORF6245P (100% identity) | S2.Lde15610ORF135P | |
| 125 | site-specific integrase | |||
| 130 | S | S1.Lde15610ORF6245P (95% identity) | S3.Lde15610ORF135P | |
| 135 | M | M.Lde15610ORF6245P (100% identity) | M.Lde15610ORF135P | |
| 140 | R | Lde15610ORF6245P (100% identity) | Lde15610ORF135P | |
| 145 | oxidoreductase | |||
| plasmid pLD02 | ||||
| 305 | sulfurtransferase | |||
| 220 | S | S1.Lde15610ORF6245P (37% identity) | S.Lde15610ORF220P | |
| 225 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1370 | tyrosine--tRNA ligase | |||
| 1380 | RM | LdeL10ORF2940P (69% identity) | Lde15610ORF1380P | |
| 1385 | ATP-dependent helicase | |||
| 5835 | 0 aa hypothetical protein | |||
| 5840 | RM | LdeL10ORF1305P (94% identity) | Lde15610ORF5840P | |
| 5845 | M | M2.Lde3035ORF2670P (97% identity) | M.Lde15610ORF5840P | |
| 5850 | flavoprotein | |||
| 9180 | 169 aa hypothetical protein | |||
| 9185 | M | M.LdeB5ORF1781P (66% identity) | M.Lde15610ORF9185P | |
| 9190 | 577 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9155 | transcriptional regulator | |||
| 9160 | R | LdeLJJMcrCP (94% identity) | Lde15610McrCP | |
| 9165 | 249 aa hypothetical protein | |||