Escherichia coli H3 |
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Putative Escherichia coli H3 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 4,630,919 bp
GenBank #: CP010167
REBASE acronym: EcoH3
Org_num: 21941
All begin RG46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5445 | endoribonuclease SymE | |||
| 5450 | S | S.SflN101ORF11675P (100% identity) | S.EcoH3ORF5455P | |
| 5455 | M | M.SspS13ORF3945P (100% identity) | M.EcoH3ORF5455P | |
| 5460 | R | SflN101ORF11675P (100% identity) | EcoH3ORF5455P | |
| 5465 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 455 | ribulose-phosphate 3-epimerase | |||
| 460 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoH3DamP |
| 465 | cell division protein DamX | |||
| 13785 | pseudogene | |||
| 13800 | M | M.EcoE1779ORF2922P (100% identity) | M.EcoH3ORF13800P | |
| 13805 | TrmB family transcriptional regulator | |||
| 16075 | multidrug DMT transporter | |||
| 16080 | V | V.SsoSE61DcmP (100% identity) | V.EcoH3DcmP | |
| 16085 | M | M.Spn7978DcmP (100% identity) | CCWGG | M.EcoH3DcmP |
| 16090 | hydrolase | |||
| 22720 | Fis family transcriptional regulator | |||
| 22725 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoH3ORF22725P |
| 22730 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5430 | 54 aa hypothetical protein | |||
| ??? | R | EcoW122GmrDP (100% identity) | EcoH3GmrDP | |
| 5445 | endoribonuclease SymE | |||