Escherichia coli D10 |
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Putative Escherichia coli D10 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 5,112,249 bp
GenBank #: CP010157
REBASE acronym: EcoD10
Org_num: 21938
All begin RG43_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3510 | transposase | |||
| 3515 | M | M.Mmo48659ORF2735P (100% identity) | M.EcoD10ORF3515P | |
| 3520 | anticodon nuclease | |||
| 3525 | S | S.Mmo48659ORF2735P (100% identity) | S.EcoD10ORF3515P | |
| 3530 | R | EcoW004ORF12170P (100% identity) | EcoD10ORF3515P | |
| 3535 | 60 aa hypothetical protein | |||
| 20640 | restriction endonuclease | |||
| 20645 | M | M.Ecos641ORF3050P (100% identity) | M.EcoD10ORF20645P | |
| 20650 | S | S.Ecos641ORF3050P (100% identity) | S.EcoD10ORF20645P | |
| 20655 | R | Ecos641ORF3050P (100% identity) | EcoD10ORF20645P | |
| 20660 | endoribonuclease SymE | |||
| 24605 | transposase | |||
| 24610 | M | M.Mmo48659ORF2735P (100% identity) | M.EcoD10ORF24610P | |
| 24615 | anticodon nuclease | |||
| 24620 | S | S.Mmo48659ORF2735P (100% identity) | S.EcoD10ORF24610P | |
| 24625 | R | EcoW004ORF12170P (100% identity) | EcoD10ORF24610P | |
| 24630 | 50S ribosome-binding GTPase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1890 | cell division protein DamX | |||
| 1895 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoD10DamP |
| 1900 | ribulose-phosphate 3-epimerase | |||
| 2505 | 59 aa hypothetical protein | |||
| 2510 | M | M.EcosS1ORF18905P (99% identity) | ATGCAT | M.EcoD10ORF2510P |
| 2515 | Fis family transcriptional regulator | |||
| 10040 | hydrolase | |||
| 10045 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.EcoD10DcmP |
| 10050 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcoD10DcmP |
| 10055 | multidrug DMT transporter | |||
| 16040 | protein ninE | |||
| 16045 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoD10ORF16045P |
| 16050 | P21 prophage-derived protein NinB | |||
| 22935 | Presumed portal vertex protein | |||
| 22940 | M | M.Eco19035ORF24895P (100% identity) | M.EcoD10ORF22940P | |
| 22945 | 339 aa hypothetical protein | |||