Escherichia coli D8 |
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Putative Escherichia coli D8 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 5,130,646 bp
GenBank #: CP010151
REBASE acronym: EcoD8
Org_num: 21871
All begin RG41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9390 | protein ninE | |||
| 9395 | M | M.EcosC25ORF16305P (100% identity) | M.EcoD8ORF9395P | |
| 9400 | P21 prophage-derived protein NinB | |||
| 15995 | restriction endonuclease | |||
| ??? | M | M.EcoS165ORF17585P (100% identity) | M.EcoD8ORF16000P | |
| 16010 | S | S.Ecost88ORF20845P (100% identity) | S.EcoD8ORF16000P | |
| 16015 | R | Ecost88ORF20845P (100% identity) | EcoD8ORF16000P | |
| 16020 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5430 | hydrolase | |||
| 5435 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoD8DcmP |
| 5440 | V | V.SflC32DcmP (74% identity) | V.EcoD8DcmP | |
| 5445 | multidrug DMT transporter | |||
| 16590 | 118 aa hypothetical protein | |||
| 16595 | M | M.EcosS3ORF15775P (100% identity) | M.EcoD8ORF16595P | |
| 16600 | ATPase | |||
| 22605 | cell division protein DamX | |||
| 22610 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoD8DamP |
| 22615 | ribulose-phosphate 3-epimerase | |||
| 23220 | 59 aa hypothetical protein | |||
| 23225 | M | M.Ecos19ORF2295P (100% identity) | ATGCAT | M.EcoD8ORF23225P |
| 23230 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17625 | 100 aa hypothetical protein | |||
| 17630 | R | EcoTE113ORF4602P (99% identity) | EcoD8ORF17635P | |
| 17635 | M | M.EcoTE113ORF4602P (100% identity) | M.EcoD8ORF17635P | |
| 17640 | ATP-dependent helicase | |||