Escherichia coli D4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli D4 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
| Sequence length: | GenBank #: | |
| Chromosome: | 4,821,305 bp | CP010143 |
| plasmid A: | 114,159 bp | CP010144 |
REBASE acronym: EcoD4
Org_num: 21867
All begin RG37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid A | ||||
| 24120 | 62 aa hypothetical protein | |||
| 24125 | M | M.Ecoi162ORF4671P (100% identity) | M.EcoD4ORF24125P | |
| 24130 | S | S.Ecoi162ORF4671P (100% identity) | S.EcoD4ORF24125P | |
| 24135 | R | EcoMY18ORF24050P (100% identity) | EcoD4ORF24125P | |
| 24140 | 158 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6335 | 75 aa hypothetical protein | |||
| 6340 | M | M.EfeC18ORF7705P (100% identity) | GATC | M.EcoD4ORF6340P |
| 6345 | 273 aa hypothetical protein | |||
| 12230 | multidrug DMT transporter | |||
| 12235 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoD4DcmP |
| 12240 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoD4DcmP |
| 12245 | hydrolase | |||
| 18930 | Fis family transcriptional regulator | |||
| 18935 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoD4ORF18935P |
| 18940 | 59 aa hypothetical protein | |||
| 19575 | ribulose-phosphate 3-epimerase | |||
| 19580 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoD4DamP |
| 19585 | cell division protein DamX | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid A | ||||
| 24185 | 76 aa hypothetical protein | |||
| 24190 | M | M.EcoD9ORF23215P (100% identity) | GATC | M.EcoD4ORF24190P |
| 24195 | 269 aa hypothetical protein | |||