Escherichia coli D3 |
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Putative Escherichia coli D3 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
| Sequence length: | GenBank #: | |
| Chromosome: | 4,971,154 bp | CP010140 |
| plasmid B: | 90,974 bp | CP010142 |
REBASE acronym: EcoD3
Org_num: 21866
All begin RG36_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2345 | 162 aa hypothetical protein | |||
| 2350 | M | M.Ecosa15ORFHP (100% identity) | GATC | M.EcoD3ORF2350P |
| 2355 | LexA family transcriptional regulator | |||
| 2390 | phage protein | |||
| 2395 | M | M.Sso63633ORF22290P (100% identity) | M.EcoD3ORF2395P | |
| 2400 | holin | |||
| 4140 | 162 aa hypothetical protein | |||
| 4145 | M | M.SflFF80ORF18305P (100% identity) | GATC | M.EcoD3ORF4145P |
| 4150 | LexA family transcriptional regulator | |||
| 13175 | multidrug DMT transporter | |||
| 13180 | V | V.SsoSE61DcmP (99% identity) | V.EcoD3DcmP | |
| 13185 | M | M.SflLIN6DcmP (99% identity) | CCWGG | M.EcoD3DcmP |
| 13190 | hydrolase | |||
| 17220 | endonuclease | |||
| 17225 | M | M.Eco4012ORF5730P (100% identity) | GATC | M.EcoD3ORF17225P |
| 17230 | 75 aa hypothetical protein | |||
| 20745 | Fis family transcriptional regulator | |||
| 20750 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoD3ORF20750P |
| 20755 | 59 aa hypothetical protein | |||
| 21380 | ribulose-phosphate 3-epimerase | |||
| 21385 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoD3DamP |
| 21390 | cell division protein DamX | |||
| plasmid B | ||||
| 25900 | 103 aa hypothetical protein | |||
| 25905 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoD3ORF25905P | |
| 25910 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4345 | resolvase | |||
| 4350 | R | SflFF80GmrDP (100% identity) | EcoD3GmrDP | |
| 4355 | protein flxA | |||