Escherichia coli D1 |
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Putative Escherichia coli D1 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
| Sequence length: | GenBank #: | |
| Chromosome: | 5,060,525 bp | CP010134 |
| plasmid B: | 55,203 bp | CP010136 |
REBASE acronym: EcoD1
Org_num: 21864
All begin RG34_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7560 | holin | |||
| 7565 | M | M.EcoK1ORF18865P (100% identity) | M.EcoD1ORF7565P | |
| 7570 | TrmB family transcriptional regulator | |||
| 14620 | cell division protein DamX | |||
| 14625 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoD1DamP |
| 14630 | ribulose-phosphate 3-epimerase | |||
| 15190 | 59 aa hypothetical protein | |||
| 15195 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.EcoD1ORF15195P |
| 15200 | Fis family transcriptional regulator | |||
| 23875 | multidrug DMT transporter | |||
| 23880 | V | V.Ecos195DcmP (100% identity) | V.EcoD1DcmP | |
| 23885 | M | M.Ecos195DcmP (100% identity) | CCWGG | M.EcoD1DcmP |
| 23890 | hydrolase | |||
| 24990 | TrmB family transcriptional regulator | |||
| 24995 | M | M.EcoDEC5BORF2703P (100% identity) | A | M.EcoD1ORF24995P |
| 25020 | anti-adapter protein IraM | |||
| plasmid B | ||||
| 25985 | 73 aa hypothetical protein | |||
| 25990 | M | M.EcoD1ORF26050P (100% identity) | M.EcoD1ORF25990P | |
| 25995 | 125 aa hypothetical protein | |||
| 26045 | 101 aa hypothetical protein | |||
| 26050 | M | M.EcoD1ORF25990P (100% identity) | M.EcoD1ORF26050P | |
| 26055 | 73 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16815 | protein ninE | |||
| 16820 | M | M.Eco6342fORF8815P (100% identity) | GATC | M.EcoD1ORF16820P |
| 16825 | P21 prophage-derived protein NinB | |||