Escherichia coli C8 |
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Putative Escherichia coli C8 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 4,901,865 bp
GenBank #: CP010125
REBASE acronym: EcoC8
Org_num: 21860
All begin RG30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1430 | membrane protein | |||
| 1435 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.EcoC8ORF1440P |
| 1440 | M | M.SflFF71ORF17365P (99% identity) | TGHAYNNNNCTNC | M.EcoC8ORF1440P |
| 1445 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8925 | pseudogene | |||
| 8930 | M | M.EcoM362ORF4535P (99% identity) | M.EcoC8ORF8930P | |
| 8945 | holin | |||
| 12810 | multidrug DMT transporter | |||
| 12815 | V | V.SsoSE61DcmP (100% identity) | V.EcoC8DcmP | |
| 12820 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC8DcmP |
| 12825 | hydrolase | |||
| 17785 | 540 aa hypothetical protein | |||
| 17790 | R | KpnSB611ORF4590P (100% identity) | GCWGC | EcoC8ORF17790P |
| 17795 | XRE family transcriptional regulator | |||
| 19980 | Fis family transcriptional regulator | |||
| 19985 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoC8ORF19985P |
| 19990 | 59 aa hypothetical protein | |||
| 20610 | ribulose-phosphate 3-epimerase | |||
| 20615 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoC8DamP |
| 20620 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1445 | 128 aa hypothetical protein | |||
| 1450 | R | SflFF71McrCP (100% identity) | EcoC8McrCP | |
| 1455 | R | SflN101McrBP (100% identity) | EcoC8McrBP | |
| 1460 | restriction endonuclease | |||