Escherichia coli C1 |
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Putative Escherichia coli C1 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 4,843,023 bp
GenBank #: CP010116
REBASE acronym: EcoC1c
Org_num: 21855
All begin RC72_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 455 | ribulose-phosphate 3-epimerase | |||
| 460 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC1cDamP |
| 465 | cell division protein DamX | |||
| 5770 | helicase | |||
| 5775 | RM | Fnu048ORFEP (100% identity) | EcoC1cORF5775P | |
| 11620 | 162 aa hypothetical protein | |||
| 11625 | M | M.EcoC1cORF20210P (99% identity) | GATC | M.EcoC1cORF11625P |
| 11630 | LexA family transcriptional regulator | |||
| 16225 | multidrug DMT transporter | |||
| 16230 | V | V.Ecos53DcmP (100% identity) | V.EcoC1cDcmP | |
| 16235 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.EcoC1cDcmP |
| 16240 | hydrolase | |||
| 20205 | LexA family transcriptional regulator | |||
| 20210 | M | M.EcoC1cORF11625P (99% identity) | GATC | M.EcoC1cORF20210P |
| 20215 | 162 aa hypothetical protein | |||
| 23650 | Fis family transcriptional regulator | |||
| 23655 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.EcoC1cORF23655P |
| 23660 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20010 | damage-inducible protein DinI | |||
| 20015 | R | Eco545GmrSDP (100% identity) | EcoC1cGmrSDP | |
| 20020 | 163 aa hypothetical protein | |||