Ralstonia solanacearum EP1 |
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Putative Ralstonia solanacearum EP1 RM systems
Ref: Li,P. et al. unpublished
REBASE ref # 23560
| Sequence length: | GenBank #: | |
| Chromosome: | 3,949,527 bp | CP015115 |
| plasmid unnamed: | 2,093,441 bp | CP015116 |
REBASE acronym: RsoEP1
Org_num: 21882
All begin AC251_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 190 | Rrf2 family transcriptional regulator | |||
| 195 | M | M.RsoX05ORF971P (100% identity) | M.RsoEP1ORF195P | |
| 200 | 284 aa hypothetical protein | |||
| 205 | R | RsoWR1ORFKP (88% identity) | RsoEP1ORF195P | |
| 210 | histidine kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1030 | plasmid stabilization protein | |||
| ??? | M | Methyltransferase | M1.RsoEP1ORF1035P | |
| 1040 | M | M2.RsoYC40ORF234P (100% identity) | M2.RsoEP1ORF1035P | |
| 1045 | 121 aa hypothetical protein | |||
| 1145 | YOPP/AvrRxv family protein | |||
| 1150 | M | M.RsoRS24ORF1185P (100% identity) | M.RsoEP1ORF1150P | |
| 1155 | 1367 aa hypothetical protein | |||
| 5750 | 118 aa hypothetical protein | |||
| 5755 | M | M.RsoUW72ORFDP (65% identity) | M.RsoEP1ORF5755P | |
| 5760 | 76 aa hypothetical protein | |||
| 7615 | tryptophan synthase subunit beta | |||
| 7620 | M | M.Rsp650ORF7450P (100% identity) | M.RsoEP1ORF7620P | |
| 7625 | tryptophan synthase subunit alpha | |||
| 13280 | 126 aa hypothetical protein | |||
| 13285 | M | M2.Rsp647ORF4655P (100% identity) | M1.RsoEP1ORF13285P | |
| 13290 | M | M2.Rsp650ORF13700P (100% identity) | M2.RsoEP1ORF13285P | |
| 13295 | 135 aa hypothetical protein | |||
| 17200 | 831 aa hypothetical protein | |||
| ??? | M | M.RsoOE11ORF8625P (100% identity) | CTGCAG | M.RsoEP1ORF17205P |
| 17210 | Sir2-family regulator | |||
| plasmid unnamed | ||||
| 21345 | 146 aa hypothetical protein | |||
| 21350 | M | M.RsoWR1ORFAP (100% identity) | M.RsoEP1ORF21350P | |
| 21355 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5710 | recombination factor protein RarA | |||
| 5715 | M | M.Rso3103ORF5405P (96% identity) | M.RsoEP1ORF5715P | |
| 5720 | R | AfaJ481ORF6790P (94% identity) | RsoEP1ORF5715P | |
| 5725 | 718 aa hypothetical protein | |||