Escherichia coli 472 |
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Putative Escherichia coli 472 RM systems
Ref: Shaaban,S. et al. unpublished
REBASE ref # 23582
| Sequence length: | GenBank #: | |
| Chromosome: | 5,513,531 bp | CP018245 |
| plasmid pO157: | 95,341 bp | CP018246 |
REBASE acronym: Eco472
Org_num: 21916
All begin BFL23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29600 | 113 aa hypothetical protein | |||
| 29605 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco472ORF29610P |
| 29610 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco472ORF29610P |
| 29615 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco472ORF29610P |
| 29620 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8855 | 242 aa hypothetical protein | |||
| 8860 | M | M.EcoF6321ORF15405P (100% identity) | M.Eco472ORF8860P | |
| 8865 | 0 aa hypothetical protein | |||
| 10565 | 61 aa hypothetical protein | |||
| 10580 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco472ORF10580P | |
| 10585 | TrmB family transcriptional regulator | |||
| 14385 | drug/metabolite exporter YedA | |||
| 14390 | V | V.EcosPA8DcmP (100% identity) | V.Eco472DcmP | |
| 14395 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco472DcmP |
| 14400 | phosphohydrolase | |||
| 15340 | protein ninE | |||
| 15345 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco472ORF15345P |
| 15350 | protein ninB | |||
| 17830 | protein ninE | |||
| 17835 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco472ORF17835P |
| 17840 | protein ninB | |||
| 23040 | Fis family transcriptional regulator | |||
| 23045 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco472ORF23045P |
| 23050 | DUF2556 domain-containing protein | |||
| 23595 | ribulose-phosphate 3-epimerase | |||
| 23600 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco472DamP |
| 23605 | cell division protein DamX | |||
| 27895 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco472ORF27900P | |
| 27910 | Eae protein | |||
| 29320 | helicase | |||
| 29325 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco472ORF29325P |
| plasmid pO157 | ||||
| 30155 | arginase | |||
| 30160 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco472ORF30160P | |
| 30165 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29590 | 293 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco472GmrDP | |
| 29600 | 113 aa hypothetical protein | |||