Escherichia coli 319 |
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Putative Escherichia coli 319 RM systems
Ref: Shaaban,S. et al. unpublished
REBASE ref # 23582
| Sequence length: | GenBank #: | |
| Chromosome: | 5,474,890 bp | CP018241 |
| plasmid pO157: | 92,495 bp | CP018242 |
REBASE acronym: Eco319
Org_num: 21914
All begin BFL24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5415 | metal-dependent hydrolase | |||
| 5420 | R | Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | Eco319ORF5440P |
| 5425 | Appr-1-p processing protein | |||
| 5430 | 218 aa hypothetical protein | |||
| 5435 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco319ORF5440P |
| 5440 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco319ORF5440P |
| 5445 | transcription factor | |||
| 29205 | 113 aa hypothetical protein | |||
| 29210 | S | S.Ecos1613ORF27060P (100% identity) | S.Eco319ORF29215P | |
| 29215 | M | M.EcosPA8ORF17615P (100% identity) | M.Eco319ORF29215P | |
| 29220 | R | Ecos1613ORF27060P (100% identity) | Eco319ORF29215P | |
| 29225 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9520 | TrmB family transcriptional regulator | |||
| 9525 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco319ORF9525P | |
| 9540 | 61 aa hypothetical protein | |||
| 14190 | drug/metabolite exporter YedA | |||
| 14195 | V | V.EcosPA8DcmP (100% identity) | V.Eco319DcmP | |
| 14200 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco319DcmP |
| 14205 | phosphohydrolase | |||
| 22325 | Fis family transcriptional regulator | |||
| 22330 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco319ORF22330P |
| 22335 | DUF2556 domain-containing protein | |||
| 22880 | ribulose-phosphate 3-epimerase | |||
| 22885 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco319DamP |
| 22890 | cell division protein DamX | |||
| 27505 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco319ORF27510P | |
| 27520 | Eae protein | |||
| 28925 | helicase | |||
| 28930 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco319ORF28930P |
| plasmid pO157 | ||||
| 29745 | arginase | |||
| 29750 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco319ORF29750P | |
| 29755 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29195 | 293 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco319GmrDP | |
| 29205 | 113 aa hypothetical protein | |||