Escherichia coli 155 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 155 RM systems
Ref: Shaaban,S. et al. unpublished
REBASE ref # 23582
| Sequence length: | GenBank #: | |
| Chromosome: | 5,513,008 bp | CP018237 |
| plasmid pO157: | 91,420 bp | CP018238 |
REBASE acronym: Eco155N
Org_num: 21912
All begin BFL20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29555 | 113 aa hypothetical protein | |||
| 29560 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco155NORF29565P |
| 29565 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco155NORF29565P |
| 29570 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco155NORF29565P |
| 29575 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11790 | 61 aa hypothetical protein | |||
| 11805 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco155NORF11805P | |
| 11810 | TrmB family transcriptional regulator | |||
| 14115 | Shiga toxin subunit A | |||
| 14135 | M | M.EcoZ1836ORF11435P (100% identity) | M.Eco155NORF14135P | |
| 14140 | 94 aa hypothetical protein | |||
| 14885 | drug/metabolite exporter YedA | |||
| 14890 | V | V.EcosPA8DcmP (100% identity) | V.Eco155NDcmP | |
| 14895 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco155NDcmP |
| 14900 | phosphohydrolase | |||
| 22940 | Fis family transcriptional regulator | |||
| 22945 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco155NORF22945P |
| 22950 | DUF2556 domain-containing protein | |||
| 23495 | ribulose-phosphate 3-epimerase | |||
| 23500 | M | DNA adenine methylase | GATC | M.Eco155NDamP |
| 23505 | cell division protein DamX | |||
| 27835 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco155NORF27840P | |
| 27850 | Eae protein | |||
| 29260 | helicase | |||
| 29265 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco155NORF29265P |
| plasmid pO157 | ||||
| 30085 | arginase | |||
| 30090 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco155NORF30090P | |
| 30095 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29545 | 293 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco155NGmrDP | |
| 29555 | 113 aa hypothetical protein | |||