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Putative Tenacibaculum species LPB0136 RM systems
Ref: Kim,E. and Yi,H. unpublished
REBASE ref # 22853
Complete sequence: 3,019,213 bp
GenBank #: CP018155
REBASE acronym: Tsp136
Org_num: 21818
All begin LPB136_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1390 | SAM-dependent methyltransferase | |||
1395 | R | OspITB9ORFAP (90% identity) | Tsp136ORF1410P | |
1400 | endonuclease | |||
1405 | S | S.TauEF2ORF3540P (42% identity) | S.Tsp136ORF1410P | |
1410 | M | M.PspNJDZ02ORF18535P (89% identity) | M.Tsp136ORF1410P | |
1415 | preprotein translocase subunit SecA | |||
4305 | 764 aa hypothetical protein | |||
4310 | C | C.PtoBORF2980P (50% identity) | C.Tsp136ORF4310P | |
4315 | 346 aa hypothetical protein | |||
8700 | 341 aa hypothetical protein | |||
8705 | R | ZamAD3ORF28120P (95% identity) | Tsp136ORF8715P | |
8710 | S | S.PspBM10II (53% identity) | S.Tsp136ORF8715P | |
8715 | M | M.ZamAD3ORF28120P (95% identity) | M.Tsp136ORF8715P | |
8720 | 297 aa hypothetical protein | |||
13495 | 63 aa hypothetical protein | |||
13500 | R | Cal14237IIP (90% identity) | Tsp136ORF13510P | |
13505 | 715 aa hypothetical protein | |||
13510 | M | M.PspMSW6ORF10875P (93% identity) | M.Tsp136ORF13510P | |
13515 | S | S.Ast1078ORFDP (32% identity) | S.Tsp136ORF13510P | |
13520 | RNA-dependent DNA polymerase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1240 | 3-oxoacyl-ACP synthase | |||
1245 | R | Fsp316ORF985P (66% identity) | CTGCAG | Tsp136ORF1250P |
1250 | M | M.Fsp316ORF985P (53% identity) | CTGCAG | M.Tsp136ORF1250P |
1255 | 797 aa hypothetical protein | |||
4310 | 100 aa hypothetical protein | |||
4315 | M | M2.PspD10ORF10495P (59% identity) | M1.Tsp136ORF4315P | |
4320 | M | M1.PspD10ORF10495P (73% identity) | M2.Tsp136ORF4315P | |
4325 | 157 aa hypothetical protein | |||
6840 | 76 aa hypothetical protein | |||
6850 | RM | Fco20170ORF18380P (67% identity) | Tsp136ORF6850P | |
6855 | 174 aa hypothetical protein | |||
13390 | 725 aa hypothetical protein | |||
13395 | M | M.Fya898ORF12910P (68% identity) | M1.Tsp136ORF13395P | |
13400 | M | M.Wsp22761ORF14280P (73% identity) | M2.Tsp136ORF13395P | |
13405 | 1215 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
12290 | DNA mismatch repair protein MutT | |||
12295 | R | OspITB9ORFBP (94% identity) | Tsp136ORF12295P | |
12300 | bile acid:sodium symporter |