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Putative Gardnerella vaginalis JCP8017B RM systems
Ref: Weinstock,G. et al. unpublished
REBASE ref # 22837
Contig set: 1,599,351 bp
GenBank #: ATJM00000000 (NZ_ATJM00000000)
REBASE acronym: Gva8017B
Org_num: 21781
All begin HMPREF1578_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
888 | site-specific recombinase, phage integrase | |||
889 | S | S2.Gva8017AORF279P (100% identity) | S1.Gva8017BORF891P | |
890 | S | S1.Gva37ORF3240P (100% identity) | S2.Gva8017BORF891P | |
891 | M | M.GvaB477ORF6083P (100% identity) | M.Gva8017BORF891P | |
892 | toxin-antitoxin system, toxin component, HicA | |||
968 | 42 aa hypothetical protein | |||
969 | R | Gva8017AORF163P (100% identity) | Gva8017BORF971P | |
970 | S | S.Gva8017AORF163P (100% identity) | S.Gva8017BORF971P | |
971 | M | M.Gva8017AORF163P (100% identity) | M.Gva8017BORF971P | |
972 | 44 aa hypothetical protein | |||
885 | ABC transporter, substrate-binding protein | |||
886 | R | GvaB482ORF3726P (100% identity) | Gva8017BORF886P | |
887 | S | S2.GvaFY17ORF4565P (43% identity) | S.Gva8017BORF886P | |
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
543 | phosphoglycerate mutase family protein | |||
544 | M | M.Gva8017AORF684P (100% identity) | GATC | M.Gva8017BORF544P |
546 | 46 aa hypothetical protein | |||
545 | R | Gva8017AORF684P (100% identity) | GATC | Gva8017BORF544P |
547 | divergent AAA domain protein | |||
1378 | 226 aa hypothetical protein | |||
1379 | M | M.Gva8017AORF1054P (100% identity) | M.Gva8017BORF1379P | |
1380 | 261 aa hypothetical protein |