Tannerella forsythia UB4 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Tannerella forsythia UB4 RM systems
Ref: Chaudhuri,R. unpublished
REBASE ref # 23129
Contig set: 3,232,117 bp
GenBank #: FMMN00000000 (NZ_FMMN00000000)
REBASE acronym: TfoUB4
Org_num: 21410
All begin ORF_, TFUB4_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | S | S.Tfo3313ORF1804P (53% identity) | S.TfoUB4ORFAP | |
| 1644 | S | S1.TfoUB20ORF1691P (99% identity) | S1.TfoUB4ORF1644P | |
| 1645 | S | S2.TfoUB20ORF1691P (100% identity) | S2.TfoUB4ORF1644P | |
| 335 | 89 aa hypothetical protein | |||
| 336 | S | S.TfoUB20ORF429P (100% identity) | S.TfoUB4ORF338P | |
| 337 | 377 aa hypothetical protein | |||
| 338 | M | M.TfoUB20ORF429P (100% identity) | M.TfoUB4ORF338P | |
| 339 | R | Tfo43037ORF1945P (100% identity) | TfoUB4ORF338P | |
| 340 | 228 aa hypothetical protein | |||
| 1639 | 686 aa hypothetical protein | |||
| 1640 | R | TfoUB20ORF1687P (100% identity) | TfoUB4ORF1641P | |
| 1641 | M | M.Tfo3313ORF1804P (98% identity) | M.TfoUB4ORF1641P | |
| 1642 | Endonuclease NucS | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1809 | Spermidine N(1)-acetyltransferase | |||
| ??? | M | M.TfoUB22ORF1804P (100% identity) | RGATCY | M.TfoUB4ORF1810P |
| 1811 | R | TfoUB22ORF1804P (100% identity) | RGATCY | TfoUB4ORF1810P |
| 1813 | Uracil-DNA glycosylase | |||
| 2626 | 76 aa hypothetical protein | |||
| 2627 | RM | Pin2931ORF6625P (99% identity) | TfoUB4ORF2627P | |
| 2628 | 215 aa hypothetical protein | |||