Escherichia coli GN1227 |
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Putative Escherichia coli GN1227 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,312,947 bp
GenBank #: LXIR00000000 (NZ_LXIR00000000)
REBASE acronym: Eco1227
Org_num: 21509
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 166 | 113 aa hypothetical protein | |||
| 169 | S | S.Eco1218ORFBP (100% identity) | CACNNNNNNNCTGG | S.Eco1227ORFAP |
| 171 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1227ORFAP |
| 173 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1227ORFAP |
| 176 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14 | 65 aa hypothetical protein ECDEC9E_3556 | |||
| 16 | M | M.Eco293ORF22050P (100% identity) | GATC | M.Eco1227ORFGP |
| 21 | LexA family transcriptional regulator | |||
| 13 | 101 aa hypothetical protein | |||
| 15 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1227ORFEP | |
| 18 | 73 aa hypothetical protein | |||
| 33 | 66 aa hypothetical protein BY68_22700 | |||
| 34 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1227ORFHP | |
| 37 | 116 aa hypothetical protein ACU67_25215 | |||
| 39 | NinB | |||
| 42 | M | M.EcoC3108ORFMP (100% identity) | GATC | M.Eco1227ORFFP |
| 47 | 64 aa hypothetical protein | |||
| 25 | membrane protein | |||
| 26 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1227ORFCP |
| 27 | Fis family transcriptional regulator | |||
| 30 | phosphohydrolase | |||
| 31 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1227DcmP |
| 33 | V | V.EcoPT54DcmP (100% identity) | V.Eco1227DcmP | |
| 37 | drug/metabolite exporter YedA | |||
| 38 | helicase | |||
| 40 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1227ORFBP |
| 49 | 138 aa hypothetical protein | |||
| 144 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1227ORFDP | |
| 151 | 116 aa hypothetical protein | |||
| 689 | cell division protein DamX | |||
| 692 | M | DamMyc-Pc | GATC | M.Eco1227DamP |
| 694 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 163 | 293 aa hypothetical protein | |||
| 164 | R | EcoX21GmrDP (100% identity) | Eco1227GmrDP | |
| 165 | 81 aa hypothetical protein Ec53638_1442 | |||