Escherichia coli GN1217 |
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Putative Escherichia coli GN1217 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,476,144 bp
GenBank #: LXJB00000000 (NZ_LXJB00000000)
REBASE acronym: Eco1217
Org_num: 21439
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 787 | 113 aa hypothetical protein | |||
| 790 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1217ORFDP |
| 792 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1217ORFDP |
| 794 | R | EcosPA8ORF17615P (99% identity) | CACNNNNNNNCTGG | Eco1217ORFDP |
| 797 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | methylase | M.Eco1217ORFCP | |
| 5 | 134 aa hypothetical protein | |||
| 8 | 66 aa hypothetical protein BY68_22700 | |||
| 9 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1217ORFJP | |
| 12 | 104 aa unknown protein encoded by prophage CP-933O | |||
| 8 | ARAC-type regulatory protein, partial | |||
| 9 | M | M.EcoTWORF1742P (100% identity) | M.Eco1217ORFKP | |
| 23 | 92 aa hypothetical protein | |||
| ??? | M | M.Eco1212ORFAP (92% identity) | GATC | M.Eco1217ORFAP |
| 30 | endonuclease | |||
| 15 | 101 aa hypothetical protein | |||
| 16 | M | M.Eco2582ORF28970P (55% identity) | M.Eco1217ORFIP | |
| 21 | 109 aa hypothetical protein | |||
| 41 | NinB | |||
| ??? | M | hypothetical protein | GATC | M.Eco1217ORFBP |
| 50 | 64 aa hypothetical protein | |||
| 30 | phosphohydrolase | |||
| 31 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1217DcmP |
| 33 | V | V.EcoPT54DcmP (100% identity) | V.Eco1217DcmP | |
| 37 | drug/metabolite exporter YedA | |||
| 142 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1217ORFHP | |
| 149 | 116 aa hypothetical protein | |||
| 660 | helicase | |||
| 662 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1217ORFEP |
| 671 | 138 aa hypothetical protein | |||
| 745 | Fis family transcriptional regulator | |||
| 746 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1217ORFFP |
| 747 | membrane protein | |||
| 695 | cell division protein DamX | |||
| 698 | M | DamMyc-Pc | GATC | M.Eco1217DamP |
| 700 | ribulose-phosphate 3-epimerase | |||
| 908 | 128 aa hypothetical protein | |||
| 911 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco1217ORFGP |
| 915 | 76 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 784 | 293 aa hypothetical protein | |||
| 785 | R | EcoX21GmrDP (100% identity) | Eco1217GmrDP | |
| 786 | 81 aa hypothetical protein Ec53638_1442 | |||