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Putative Neisseria meningitidis VB15548 RM systems
Ref: Veeraraghavan,B. et al. unpublished
REBASE ref # 23095
Contig set: 2,119,692 bp
GenBank #: MDSI00000000 (NZ_MDSI00000000)
REBASE acronym: Nme15548
Org_num: 21690
All begin BFX79_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
5975 | ATP-dependent Clp protease ATP-binding subunit | |||
5980 | R | Nme13856ORF5950P (100% identity) | Nme15548ORF5995P | |
5985 | S | S.Nme53442ORF790P (100% identity) | S.Nme15548ORF5995P | |
5990 | cell filamentation protein Fic | |||
5995 | M | M.Nme53442ORF790P (100% identity) | M.Nme15548ORF5995P | |
6000 | ADP-glyceromanno-heptose 6-epimerase | |||
335 | uracil-DNA glycosylase | |||
??? | M | M.Nme53442ORF1103AP (100% identity) | M.Nme15548ORF340P | |
350 | restriction endonuclease | |||
??? | type I restriction-modification protein subunit M | |||
350 | M | restriction endonuclease | M.Nme15548ORF350P | |
355 | 133 aa hypothetical protein | |||
535 | 0 aa hypothetical protein | |||
540 | M | M.Nme53442ORF1140P (100% identity) | M.Nme15548ORF540P | |
545 | S | S.Nme53442ORF1140P (100% identity) | S.Nme15548ORF540P | |
550 | R | Nme53442ORF1140P (100% identity) | Nme15548ORF540P | |
555 | recombination factor protein RarA | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
9100 | leucine--tRNA ligase | |||
??? | R | Nme53442ORF325P (100% identity) | GATC | Nme15548ORF9105P |
9110 | leucyl-tRNA synthetase | |||
8860 | RNA-binding transcriptional accessory protein | |||
??? | M | pseudogene | GGTGA | M.Nme15548ORFAP |
4280 | DEAD/DEAH box helicase | |||
??? | R | Nme53442ORF747P (100% identity) | GCSGC | Nme15548ORF4290P |
4290 | M | M.Nme53442ORF747P (100% identity) | GCSGC | M.Nme15548ORF4290P |
4295 | 0 aa hypothetical protein | |||
6000 | ADP-glyceromanno-heptose 6-epimerase | |||
6005 | R | Nme53442ORF787P (100% identity) | Nme15548ORF6010P | |
6010 | M | M.Nme9714ORF1079P (100% identity) | M.Nme15548ORF6010P | |
6015 | 323 aa hypothetical protein | |||
2275 | 243 aa hypothetical protein | |||
??? | RM | Nme53442ORF1507P (100% identity) | Nme15548ORF2280P | |
2290 | phosphoglyceromutase | |||
1385 | ribonucleoside-diphosphate reductase subunit | |||
1390 | M | M.NmeMC58ORF1290P (100% identity) | CCWGG | M.Nme15548ORF1390P |
1395 | R | restriction endonuclease | CCWGG | Nme15548ORF1390P |
1400 | ribonucleotide-diphosphate reductase subunit | |||
645 | 3-isopropylmalate dehydratase small subunit | |||
650 | M | M.Npo43768ORF501P (100% identity) | GGNNCC | M.Nme15548ORF650P |
655 | R | Npo43768ORF501P (100% identity) | GGNNCC | Nme15548ORF650P |
660 | 3-isopropylmalate dehydrogenase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
945 | alpha-hydroxy-acid oxidizing enzyme | |||
950 | R | Nme777ORF10760P (100% identity) | Nme15548ORF955P | |
??? | M | M.Nme53442ORF1287P (97% identity) | M.Nme15548ORF955P | |
965 | tRNA pseudouridine(55) synthase TruB |