Neisseria meningitidis VB13856 |
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Putative Neisseria meningitidis VB13856 RM systems
Ref: Balaji,V. et al. unpublished
REBASE ref # 23095
Contig set: 2,114,647 bp
GenBank #: MDSH00000000 (NZ_MDSH00000000)
REBASE acronym: Nme13856
Org_num: 21648
All begin BFX78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5930 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5935 | R | Nme15548ORF5995P (100% identity) | Nme13856ORF5950P | |
| 5940 | S | S.Nme53442ORF790P (100% identity) | S.Nme13856ORF5950P | |
| 5945 | cell filamentation protein Fic | |||
| 5950 | M | M.Nme53442ORF790P (100% identity) | M.Nme13856ORF5950P | |
| 5955 | ADP-glyceromanno-heptose 6-epimerase | |||
| 335 | uracil-DNA glycosylase | |||
| ??? | M | M.Nme53442ORF1103AP (100% identity) | M.Nme13856ORF340P | |
| 350 | restriction endonuclease | |||
| ??? | type I restriction-modification protein subunit M | |||
| 350 | M | restriction endonuclease | M.Nme13856ORF350P | |
| 355 | 133 aa hypothetical protein | |||
| 540 | 0 aa hypothetical protein | |||
| 545 | M | M.Nme53442ORF1140P (100% identity) | M.Nme13856ORF545P | |
| 550 | S | S.Nme53442ORF1140P (100% identity) | S.Nme13856ORF545P | |
| 555 | R | Nme53442ORF1140P (100% identity) | Nme13856ORF545P | |
| 560 | recombination factor protein RarA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | DNA -methyltransferase | GGTGA | M.Nme13856ORF8615P |
| 8625 | RNA-binding transcriptional accessory protein | |||
| 5955 | ADP-glyceromanno-heptose 6-epimerase | |||
| 5960 | R | Nme53442ORF787P (100% identity) | Nme13856ORF5965P | |
| 5965 | M | M.Nme9714ORF1079P (100% identity) | M.Nme13856ORF5965P | |
| 5970 | 323 aa hypothetical protein | |||
| 1610 | phosphoglyceromutase | |||
| ??? | RM | Nme53442ORF1507P (99% identity) | Nme13856ORFAP | |
| 1625 | 243 aa hypothetical protein | |||
| 4650 | leucyl-tRNA synthetase | |||
| ??? | R | Nme53442ORF325P (100% identity) | GATC | Nme13856ORF4655P |
| 4660 | leucine--tRNA ligase | |||
| 2435 | DEAD/DEAH box helicase | |||
| ??? | R | Nme53442ORF747P (100% identity) | GCSGC | Nme13856ORF2445P |
| 2445 | M | M.Nme53442ORF747P (100% identity) | GCSGC | M.Nme13856ORF2445P |
| 2450 | 0 aa hypothetical protein | |||
| 1380 | ribonucleoside-diphosphate reductase subunit | |||
| 1385 | M | M.NmeMC58ORF1290P (100% identity) | CCWGG | M.Nme13856ORF1385P |
| 1390 | R | NmeMC58ORF1290P (100% identity) | CCWGG | Nme13856ORF1385P |
| 1395 | ribonucleotide-diphosphate reductase subunit | |||
| 650 | 3-isopropylmalate dehydratase small subunit | |||
| 655 | M | M.Npo43768ORF501P (100% identity) | GGNNCC | M.Nme13856ORF655P |
| 660 | R | Npo43768ORF501P (100% identity) | GGNNCC | Nme13856ORF655P |
| 665 | 3-isopropylmalate dehydrogenase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 945 | alpha-hydroxy-acid oxidizing enzyme | |||
| 950 | R | Nme777ORF10760P (100% identity) | Nme13856ORF955P | |
| 955 | M | M.Nme212ORF8855P (93% identity) | M.Nme13856ORF955P | |
| 960 | tRNA pseudouridine(55) synthase TruB | |||