Frankia species BR |
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Putative Frankia species BR RM systems
Ref: D'Angelo,T.S. et al. unpublished
REBASE ref # 22804
Contig set: 5,221,662 bp
GenBank #: LRTJ00000000 (NZ_LRTJ00000000)
REBASE acronym: FspBR
Org_num: 21477
All begin AAY23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10711 | Insertion element 4 transposase N-terminal | |||
| 10712 | R | FspCcI6ORF4613P (99% identity) | FspBRORF10714P | |
| 10713 | S | S.FspCcI6ORF4613P (99% identity) | S.FspBRORF10714P | |
| 10714 | M | M.FspCcI6ORF4613P (99% identity) | M.FspBRORF10714P | |
| 10715 | 56 aa hypothetical protein | |||
| 102445 | 76 aa hypothetical protein | |||
| 102446 | M | M.FspCcI6ORF874P (100% identity) | M.FspBRORF102446P | |
| 102447 | S | S.FspCcI6ORF874P (99% identity) | S.FspBRORF102446P | |
| 102448 | R | FspCcI6ORF874P (99% identity) | FspBRORF102446P | |
| 102449 | RND family efflux transporter, MFP subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 101710 | 38 aa hypothetical protein | |||
| 101711 | M | M.FspCcI6ORF2866P (99% identity) | M.FspBRORF101711P | |
| 101712 | Protein of unknown function (DUF2637) | |||
| 11079 | 1227 aa hypothetical protein | |||
| 110710 | RM | FspCcI6ORF3450P (99% identity) | FspBRORF110710P | |
| 110711 | serine/threonine protein kinase | |||
| 110515 | Streptomycin adenylyltransferase | |||
| 110516 | R | FspCcI6ORF4439P (99% identity) | CTGCAG | FspBRORF110517P |
| 110517 | M | M.FspCcI6ORF4439P (99% identity) | CTGCAG | M.FspBRORF110517P |
| 110518 | 70 aa hypothetical protein | |||
| 102726 | 97 aa hypothetical protein | |||
| ??? | M | M.FspThrORF1200P (100% identity) | CCCGGG | M.FspBRORF102727P |
| 102728 | 105 aa hypothetical protein | |||
| 109323 | 181 aa hypothetical protein | |||
| 109324 | RM | FspA2ORF4150P (99% identity) | FspBRORF109324P | |
| 109325 | helicase family protein | |||
| 106242 | 124 aa hypothetical protein | |||
| 106243 | M | M.FspCcI6ORF3335P (100% identity) | CCGCGG | M.FspBRORF106243P |
| 106244 | V | V.FspCcI6ORF3335P (100% identity) | V.FspBRORF106243P | |
| 106245 | 200 aa hypothetical protein | |||
| 104779 | serine/threonine protein kinase | |||
| 104780 | M | M.FspThrORF1852P (100% identity) | M.FspBRORF104780P | |
| 104781 | protein of unknown function (DUF1998) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10489 | T5orf172 domain-containing protein | |||
| 104810 | R | FspThrMrr2P (100% identity) | FspBRMrr2P | |
| 104811 | 298 aa hypothetical protein | |||
| 101615 | carbohydrate ABC transporter membrane protein 2, | |||
| 101616 | R | FspThrMcrCP (100% identity) | FspBRMcrCP | |
| 101617 | R | FspCcI6McrBP (99% identity) | FspBRMcrBP | |
| 101618 | 414 aa hypothetical protein | |||
| 104821 | acetyltransferase, ribosomal protein | |||
| 104822 | R | FspThrMrr3P (100% identity) | FspBRMrrP | |
| 104823 | 104 aa hypothetical protein | |||