Vibrio cholerae NCTC5395 |
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Putative Vibrio cholerae NCTC5395 RM systems
Ref: Hu,D. et al. Proc. Natl. Acad. Sci. U.S.A. (2016) In press
REBASE ref # 23207
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,981,414 bp | CP013317 |
| chromosome 2: | 1,188,831 bp | CP013318 |
REBASE acronym: Vch5395
Org_num: 21061
All begin ASZ85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1728 | 706 aa hypothetical protein | |||
| 1729 | R | VspNIH41ORF1746P (100% identity) | Vch5395ORF1733P | |
| 1730 | 663 aa hypothetical protein | |||
| 1731 | 470 aa hypothetical protein | |||
| ??? | S | S.VchV52ORF8545P (100% identity) | S.Vch5395ORF1733P | |
| 1733 | M | M.VspNIH41ORF1746P (100% identity) | M.Vch5395ORF1733P | |
| 1734 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2019 | 67 aa hypothetical protein | |||
| 2020 | M | M.Vch9420ORF2084P (100% identity) | M.Vch5395ORF2020P | |
| 2021 | 115 aa hypothetical protein | |||
| 2615 | ribulose-phosphate 3-epimerase | |||
| 2616 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch5395DamP |
| 2617 | DamX-like protein | |||
| chromosome 2 | ||||
| 3009 | guanosine 5-monophosphate oxidoreductase | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch5395ORF3010P |
| 3011 | 638 aa hypothetical protein | |||
| 3313 | 82 aa hypothetical protein | |||
| 3314 | M | M.VspNIH41ORF3529P (94% identity) | M.Vch5395ORF3314P | |
| 3315 | 44 aa hypothetical protein | |||