Vibrio cholerae E9120 |
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Putative Vibrio cholerae E9120 RM systems
Ref: Hu,D. et al. Proc. Natl. Acad. Sci. U.S.A. (2016) In press
REBASE ref # 23207
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,961,701 bp | CP013313 |
| chromosome 2: | 1,105,026 bp | CP013314 |
REBASE acronym: Vch9120
Org_num: 21059
All begin ASZ79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1780 | 706 aa hypothetical protein | |||
| 1781 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | Vch9120ORF1785P |
| 1782 | 663 aa hypothetical protein | |||
| 1783 | 470 aa hypothetical protein | |||
| 1784 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.Vch9120ORF1785P |
| 1785 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch9120ORF1785P |
| 1786 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2615 | ribulose-phosphate 3-epimerase | |||
| 2616 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch9120DamP |
| 2617 | DamX-like protein | |||
| chromosome 2 | ||||
| 2972 | GMP reductase | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch9120ORF2973P |
| 2974 | 638 aa hypothetical protein | |||
| 3310 | 64 aa hypothetical protein | |||
| 3311 | M | M.VspNIH41ORF3529P (94% identity) | M.Vch9120ORF3311P | |
| 3312 | 44 aa hypothetical protein | |||