Salmonella enterica subsp. enterica serovar Typhimurium 22792 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium 22792 RM systems
Ref: Ogunremi,D. et al. unpublished
REBASE ref # 23464
| Sequence length: | GenBank #: | |
| Chromosome: | 4,806,964 bp | CP017621 |
| plasmid unnamed1: | 93,595 bp | CP017620 |
REBASE acronym: Sen22792
Org_num: 21090
All begin BKC12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22805 | 110 aa hypothetical protein | |||
| 22810 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen22792ORF22815P |
| 22815 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen22792ORF22815P |
| 22820 | R | SenA242IIP (100% identity) | GAGNNNNNNRTAYG | Sen22792ORF22815P |
| 22825 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9910 | drug/metabolite exporter YedA | |||
| 9915 | V | V.StyUK1DcmP (100% identity) | V.Sen22792DcmP | |
| 9920 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen22792DcmP |
| 9925 | phosphohydrolase | |||
| 10140 | crossover junction endodeoxyribonuclease | |||
| 10145 | M | M.StyUK1V (100% identity) | GATC | M.Sen22792ORF10145P |
| 10150 | 160 aa hypothetical protein | |||
| 17195 | Fis family transcriptional regulator | |||
| 17200 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22792ORF17200P |
| 17205 | DUF2556 domain-containing protein | |||
| 20620 | cell division protein DamX | |||
| 20625 | M | DNA adenine methylase | GATC | M.Sen22792DamP |
| 20630 | ribulose-phosphate 3-epimerase | |||
| 22645 | 363 aa hypothetical protein | |||
| 22650 | RM | StyUK1IV (100% identity) | GATCAG | Sen22792ORF22650P |
| 22655 | DNA repair protein | |||
| plasmid unnamed1 | ||||
| 23515 | 62 aa hypothetical protein | |||
| 23520 | M | M.SenA242ORF4793P (96% identity) | M.Sen22792ORF23520P | |
| 23525 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1785 | MFS transporter | |||
| 1790 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen22792ORF1790P |
| 1795 | R | StyUK1IP (99% identity) | CAGAG | Sen22792ORF1790P |
| 1800 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22820 | type I restriction-modification system | |||
| 22825 | R | StyUK1MrrP (100% identity) | Sen22792MrrP | |
| 22830 | 95 aa hypothetical protein | |||