Planktothrix agardhii 7805 |
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Putative Planktothrix agardhii 7805 RM systems
Ref: Genoscope -,C.E.A. unpublished
REBASE ref # 22457
| Sequence length: | GenBank #: | |
| Chromosome: | 151,880 bp | LO018305 |
| Chromosome: | 4,700,732 bp | LO018304 |
REBASE acronym: Pag7805
Org_num: 21152
All begin PLAM_, PLAM_mp
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 71 | protein of unknown function | |||
| 72 | R | PagC7805ORF4369P (100% identity) | Pag7805ORF81P | |
| 73 | conserved protein of unknown function | |||
| 74 | conserved protein of unknown function | |||
| 75 | S | S.PagC7805ORF4369P (100% identity) | S.Pag7805ORF81P | |
| 76 | protein of unknown function | |||
| 77 | conserved protein of unknown function | |||
| 78 | conserved protein of unknown function | |||
| 79 | conserved protein of unknown function | |||
| 80 | Similarity | |||
| 81 | M | M.PagC7805ORF4369P (100% identity) | M.Pag7805ORF81P | |
| 82 | conserved protein of unknown function | |||
| 138 | conserved protein of unknown function | |||
| ??? | R | PagC7805ORF4457P (100% identity) | Pag7805ORF148P | |
| 141 | conserved protein of unknown function | |||
| 142 | protein of unknown function | |||
| 143 | transposase | |||
| 144 | transposase (fragment) | |||
| 145 | conserved protein of unknown function | |||
| 146 | conserved protein of unknown function | |||
| 147 | Type I restriction enzyme R protein (fragment) | |||
| 148 | M | protein of unknown function | M.Pag7805ORF148P | |
| 149 | transposase (fragment) | |||
| Chromosome | ||||
| 2148 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
| 2149 | M | M.PagC7805ORF2203P (100% identity) | M.Pag7805ORF2149P | |
| 2150 | Genome sequencing data, contig C328 | |||
| 2151 | conserved protein of unknown function | |||
| 2152 | S | S.PagC7805ORF2203P (100% identity) | S.Pag7805ORF2149P | |
| 2153 | R | PagC7805ORF2203P (100% identity) | Pag7805ORF2149P | |
| 2154 | conserved protein of unknown function | |||
| 2297 | conserved protein of unknown function | |||
| 2298 | M | M.PagC7805ORF2055P (100% identity) | M.Pag7805ORF2298P | |
| 2299 | Predicted nucleic acid-binding protein, contains | |||
| 3989 | conserved protein of unknown function | |||
| 3990 | R | PagC7805ORF333P (100% identity) | Pag7805ORF4004P | |
| 3991 | conserved protein of unknown function | |||
| 3992 | conserved protein of unknown function | |||
| 3993 | conserved protein of unknown function | |||
| 3994 | S | S.PagC7805ORF333P (100% identity) | S.Pag7805ORF4004P | |
| 3995 | conserved protein of unknown function | |||
| 3996 | conserved protein of unknown function | |||
| 3997 | conserved protein of unknown function | |||
| 3998 | conserved protein of unknown function | |||
| 3999 | conserved protein of unknown function | |||
| 4000 | DNA polymerase beta domain | |||
| 4001 | Prevent-host-death family protein | |||
| 4002 | YcfA family protein | |||
| 4003 | conserved protein of unknown function | |||
| 4004 | M | M.PagC7805ORF333P (100% identity) | M.Pag7805ORF4004P | |
| 4005 | conserved protein of unknown function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 91 | conserved protein of unknown function | |||
| 92 | RM | PagC7805ORF4359P (100% identity) | Pag7805ORF92P | |
| 93 | conserved protein of unknown function | |||
| Chromosome | ||||
| 312 | protein of unknown function | |||
| 313 | M | M.PagC7805ORF4051P (100% identity) | AGTACT | M.Pag7805ORF313P |
| 314 | DNA polymerase III, alpha subunit | |||
| 327 | conserved protein of unknown function | |||
| 328 | M | M.PagC7805ORF4035P (100% identity) | M.Pag7805ORF328P | |
| 329 | Diaminopimelate decarboxylase | |||
| 365 | Phosphonate-transporting ATPase | |||
| 366 | M | M.PagC7805ORF3994P (100% identity) | GDGCHC | M.Pag7805ORF366P |
| 367 | GTP-dependent nucleic acid-binding | |||
| 381 | Phycobiliprotein ApcE | |||
| 382 | RM | PagC7805ORF3978P (100% identity) | Pag7805ORF382P | |
| 383 | conserved exported protein of unknown function | |||
| 472 | Ribonuclease J | |||
| 473 | M | M.PagC7805ORF3889P (100% identity) | M.Pag7805ORF473P | |
| 474 | R | PagC7805ORF3889P (100% identity) | Pag7805ORF473P | |
| 475 | Helix-turn-helix | |||
| 569 | Histidine kinase | |||
| 570 | M | M.PagC7805ORF3793P (100% identity) | CCSGG | M.Pag7805ORF570P |
| 571 | R | PagC7805ORF3793P (100% identity) | CCSGG | Pag7805ORF570P |
| 572 | Photosystem I P700 chlorophyll a apoprotein A2 | |||
| 860 | conserved protein of unknown function | |||
| 861 | M | M.PagC7805DndEP (100% identity) | M.Pag7805DndEP | |
| 862 | conserved protein of unknown function | |||
| 861 | DNA sulfur modification protein DndE | |||
| 862 | M | M.PagC7805DndDP (100% identity) | M.Pag7805DndDP | |
| 863 | conserved protein of unknown function | |||
| 862 | conserved protein of unknown function | |||
| 863 | M | M.PagC7805DndCP (100% identity) | M.Pag7805DndCP | |
| 864 | HNH endonuclease family protein | |||
| 1067 | 30S ribosomal subunit protein S15 | |||
| 1068 | M | M.PagC7805ORF3304P (100% identity) | GGYRCC | M.Pag7805ORF1068P |
| 1069 | protein of unknown function | |||
| 1166 | MEKHLA domain protein | |||
| 1167 | RM | PagC7805ORF3205P (100% identity) | Pag7805ORF1167P | |
| 1168 | Na+/H+ antiporter | |||
| 1169 | TrkA-N domain protein | |||
| 1170 | ABC transporter I family member 10, | |||
| 1171 | conserved protein of unknown function | |||
| 1172 | conserved protein of unknown function | |||
| 1173 | conserved protein of unknown function | |||
| 1174 | M | M.PagC7805ORF3198P (100% identity) | GAATTC | M.Pag7805ORF1167P |
| 1175 | Sugar fermentation stimulation protein homolog | |||
| 1178 | Adenosylhomocysteinase | |||
| 1179 | M | M.PagC7805ORF3193P (100% identity) | RGCGCY | M.Pag7805ORF1179P |
| 1180 | conserved protein of unknown function | |||
| 1430 | conserved protein of unknown function | |||
| 1431 | RM | PagC7805ORF2940P (100% identity) | Pag7805ORF1431P | |
| 1432 | enzyme | |||
| 1498 | Phosphomethylpyrimidine synthase | |||
| 1499 | M | M.PagC7805ORF2870P (100% identity) | TCCGGA | M.Pag7805ORF1499P |
| 1500 | R | PagC7805ORF2870P (100% identity) | TCCGGA | Pag7805ORF1499P |
| 1501 | copper-transporting ATPase SynA | |||
| 1512 | protein of unknown function | |||
| 1513 | R | PagC7805ORF2856P (100% identity) | ATTTAAAT | Pag7805ORF1514P |
| 1514 | M | M.PagC7805ORF2856P (100% identity) | ATTTAAAT | M.Pag7805ORF1514P |
| 1515 | protein of unknown function | |||
| 1709 | conserved protein of unknown function | |||
| 1710 | M | M.PagC7805ORF2647P (100% identity) | CYCGRG | M.Pag7805ORF1710P |
| 1711 | R | Pag204ORF30800P (100% identity) | CYCGRG | Pag7805ORF1710P |
| 1712 | PAP fibrillin family protein | |||
| 1738 | Methyltransferase type 11 | |||
| 1739 | M | M.Pag204ORF30400P (99% identity) | ATGCAT | M.Pag7805ORF1739P |
| 1740 | R | PagC7805ORF2617P (100% identity) | ATGCAT | Pag7805ORF1739P |
| 1741 | fragment of pyridine nucleotide | |||
| 1749 | conserved protein of unknown function | |||
| 1750 | RM | PagC7805ORF2607P (100% identity) | Pag7805ORF1750P | |
| 1751 | protein of unknown function | |||
| 1936 | conserved protein of unknown function | |||
| 1937 | M | M.PagC7805ORF2416P (100% identity) | GRCGYC | M.Pag7805ORF1937P |
| 1938 | Glycosyl transferase family 39 | |||
| 1994 | dihydroorotase-like protein | |||
| 1995 | M | M.PagC7805ORF2355P (100% identity) | CGATCG | M.Pag7805ORF1995P |
| 1996 | Deoxyribose-phosphate aldolase | |||
| 2039 | protein of unknown function | |||
| 2040 | RM | PagC7805ORF2306P (100% identity) | Pag7805ORF2040P | |
| 2041 | Adenylate cyclase | |||
| 2249 | Peptidase C14, caspase catalytic subunit p20 | |||
| 2250 | M | M.PagC7805ORF2102P (100% identity) | GAATTC | M.Pag7805ORF2250P |
| 2251 | protein of unknown function | |||
| 2252 | protein of unknown function | |||
| 2253 | M | M.PagC7805ORF2099P (100% identity) | CTTAAG | M.Pag7805ORF2253P |
| 2254 | protein of unknown function | |||
| 2259 | fragment of Genome sequencing data, contig C262 | |||
| 2260 | R | PagC7805ORF2092P (100% identity) | ATCGAT | Pag7805ORF2261P |
| 2261 | M | M.PagC7805ORF2092P (100% identity) | ATCGAT | M.Pag7805ORF2261P |
| 2262 | fragment of Genome sequencing data, contig C262 | |||
| 2418 | RNA helicase | |||
| 2420 | M | M.PagC7805ORF1933P (60% identity) | M.Pag7805ORF2420P | |
| 2421 | conserved exported protein of unknown function | |||
| 2473 | conserved protein of unknown function | |||
| 2474 | M | M.PagC7805ORF1879P (100% identity) | GGATCC | M.Pag7805ORF2474P |
| 2475 | protein of unknown function | |||
| 2526 | Phosphoenolpyruvate synthase-like protein | |||
| 2527 | R | Pru82ORF2026P (100% identity) | TCTAGA | Pag7805ORF2528P |
| 2528 | M | M.PagC7805ORF1828P (100% identity) | TCTAGA | M.Pag7805ORF2528P |
| 2529 | conserved protein of unknown function | |||
| 2573 | 3-oxoacyl-(Acyl carrier protein) synthase II | |||
| 2574 | M | M.PagC7805ORF1783P (100% identity) | GCSGC | M.Pag7805ORF2574P |
| 2575 | conserved protein of unknown function | |||
| 2620 | GTPase Der | |||
| 2621 | RM | PagC7805ORF1734P (100% identity) | Pag7805ORF2621P | |
| 2622 | conserved protein of unknown function | |||
| 2634 | conserved protein of unknown function | |||
| 2635 | M | M.PagC7805ORF1719P (100% identity) | M.Pag7805ORF2635P | |
| 2636 | protein of unknown function | |||
| 2785 | conserved protein of unknown function | |||
| 2786 | RM | PagC7805ORF1567P (100% identity) | Pag7805ORF2786P | |
| 2787 | protein of unknown function | |||
| 2888 | Response regulator receiver domain protein | |||
| 2889 | M | M.PagC7805ORFAP (100% identity) | GCTAGC | M.Pag7805ORF2889P |
| 2890 | R | PagC7805ORFAP (100% identity) | GCTAGC | Pag7805ORF2889P |
| 2891 | conserved protein of unknown function | |||
| 2897 | conserved protein of unknown function | |||
| 2898 | RM | PagC7805ORF1459P (100% identity) | Pag7805ORF2898P | |
| 2899 | conserved protein of unknown function | |||
| 3193 | Ferredoxin-dependent glutamate synthase 2 | |||
| 3194 | R | PagC7805ORF1153P (100% identity) | Pag7805ORF3196P | |
| 3195 | conserved protein of unknown function | |||
| 3196 | M | M.PagC7805ORF1153P (100% identity) | GTCGAC | M.Pag7805ORF3196P |
| 3197 | glycolate oxidase, subunit GlcD | |||
| 3231 | Similar to tr|P73393|P73393 | |||
| 3232 | M | M.PagC7805ORF1117P (100% identity) | M.Pag7805ORF3232P | |
| 3233 | 133 aa conserved hypothetical protein; | |||
| 3253 | protein of unknown function | |||
| 3254 | M | M.PagC7805ORF1094P (100% identity) | GATC | M.Pag7805ORF3254P |
| 3255 | protein of unknown function | |||
| 3283 | conserved protein of unknown function | |||
| 3284 | R | PagC7805ORF1063P (100% identity) | Pag7805ORF3285P | |
| 3285 | M | M.PagC7805ORF1063P (100% identity) | M.Pag7805ORF3285P | |
| 3286 | ABC transporter permease protein | |||
| 3325 | CO2 hydration protein | |||
| 3326 | RM | PagC7805ORF1021P (98% identity) | Pag7805ORF3326P | |
| 3327 | Adenylate cyclase | |||
| 3404 | Plasmid stabilization system protein, RelE/ParE | |||
| 3405 | RM | PagC7805ORF933P (100% identity) | Pag7805ORF3405P | |
| 3406 | conserved membrane protein of unknown function | |||
| 3613 | Sulfite reductase [ferredoxin] | |||
| 3614 | RM | PagC7805ORF720BP (100% identity) | Pag7805ORF3614BP | |
| 3615 | RM | PagC7805ORF720AP (100% identity) | Pag7805ORF3614AP | |
| 3616 | Anthranilate phosphoribosyltransferase | |||
| 3705 | 3-5 exonuclease family protein | |||
| 3706 | M | M.PagC7805ORF630P (100% identity) | AGATCT | M.Pag7805ORF3706P |
| 3707 | conserved protein of unknown function | |||
| 3897 | conserved protein of unknown function | |||
| ??? | M | M.PagC7805ORF437P (92% identity) | CTGCAG | M.Pag7805ORF3898P |
| 3900 | protein of unknown function | |||
| 3970 | conserved protein of unknown function | |||
| 3971 | M | M.PagC7805ORF365P (100% identity) | M.Pag7805ORF3971P | |
| 3972 | tRNA(fMet)-specific endonuclease VapC | |||
| 4138 | conserved exported protein of unknown function | |||
| 4139 | M | M.PagC7805ORF200P (100% identity) | CAGCTG | M.Pag7805ORF4139P |
| 4140 | ABC transporter, ATP-binding protein | |||
| 4179 | conserved protein of unknown function | |||
| 4180 | M | M.PagC7805ORF158P (100% identity) | CCTNAGG | M.Pag7805ORF4180P |
| 4181 | ATP-binding protein of ABC transporter | |||
| 4319 | Acetate kinase | |||
| 4320 | M | M.PagC7805ORF17P (100% identity) | M.Pag7805ORF4320P | |
| 4321 | R | PagC7805ORF17P (100% identity) | Pag7805ORF4320P | |
| 4322 | conserved membrane protein of unknown function | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1388 | conserved protein of unknown function | |||
| 1389 | M | M.PagC7805ORF2983P (100% identity) | M.Pag7805ORF1389P | |
| 1390 | protein of unknown function | |||
| 2717 | conserved protein of unknown function | |||
| ??? | M | M.PagC7805ORF1634AP (70% identity) | M.Pag7805ORF2718P | |
| 2720 | conserved protein of unknown function | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 682 | SMC protein-like | |||
| 683 | R | Pru108MrrP (100% identity) | Pag7805MrrP | |
| 684 | conserved protein of unknown function | |||
| 3108 | conserved protein of unknown function | |||
| 3109 | R | PagC7805McrBP (100% identity) | Pag7805McrBP | |
| 3110 | protein of unknown function | |||
| 3111 | R | PagC7805McrCP (100% identity) | Pag7805McrCP | |
| 3112 | transcription regulator with HTH domain | |||