Ichthyobacterium seriolicida JBKA-6 |
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Putative Ichthyobacterium seriolicida JBKA-6 RM systems
Ref: Takano,T. et al. unpublished
REBASE ref # 23457
Complete sequence: 1,921,407 bp
GenBank #: AP014564
REBASE acronym: IseJBKA6
Org_num: 20987
All begin JBKA6_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10 | rod shape-determining protein RodA | |||
| 11 | R | type I restriction-modification system, | IseJBKA6ORF13P | |
| 12 | S | S.Nsp0918ORF1734P (38% identity) | S.IseJBKA6ORF13P | |
| 13 | M | M.Lsp138ORF7825P (77% identity) | M.IseJBKA6ORF13P | |
| 14 | 372 aa hypothetical protein | |||
| 577 | metal-dependent hydrolase | |||
| 578 | R | DspP16ORF80P (80% identity) | IseJBKA6ORF580P | |
| 579 | S | S.Pex17835ORF5608P (44% identity) | S.IseJBKA6ORF580P | |
| 580 | M | M.Nsp3355ORF2730P (73% identity) | M.IseJBKA6ORF580P | |
| 581 | 40 aa hypothetical protein | |||
| 1349 | 56 aa hypothetical protein | |||
| 1350 | R | AspYM273ORF15875P (86% identity) | IseJBKA6ORF1352P | |
| 1351 | S | S.Gsp29III (47% identity) | S.IseJBKA6ORF1352P | |
| 1352 | M | M.AspYM273ORF15875P (88% identity) | M.IseJBKA6ORF1352P | |
| ??? | Uncharacterized protein | |||
| 1414 | 297 aa hypothetical protein | |||
| 1415 | M | M.Tmo45135ORFCP (53% identity) | M.IseJBKA6ORF1415P | |
| 1416 | 1104 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 321 | UDP-N-acetylenolpyruvoylglucosamine reductase | |||
| 322 | M | M.Tpu847ORF3645P (58% identity) | CGCG | M.IseJBKA6ORF322P |
| 323 | 270 aa hypothetical protein | |||
| 371 | 1253 aa hypothetical protein | |||
| 372 | M | M.Ssp9304ORF2562P (64% identity) | CCGG | M.IseJBKA6ORF372P |
| ??? | R | Ssp6780ORF10850P (47% identity) | CCGG | IseJBKA6ORF372P |
| 374 | prolyl endopeptidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1352 | type I restriction-modification system, | |||
| ??? | C | C.Ale2010ORFDP (58% identity) | C.IseJBKA6ORFAP | |
| 1353 | ribosome small subunit-stimulated GTPase EngC | |||