Escherichia coli K-12 substr. W3110 |
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Putative Escherichia coli K-12 substr. W3110 RM systems
Ref: Finkel,S.E. and Lacey,W.L. unpublished
REBASE ref # 23251
Complete sequence: 4,541,211 bp
GenBank #: CP017979
REBASE acronym: EcoZK126
Org_num: 21127
All begin BL257_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22195 | 113 aa hypothetical protein | |||
| 22200 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoZK126ORF22205P |
| 22205 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoZK126ORF22205P |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | EcoZK126ORF22205P |
| ??? | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9835 | drug/metabolite exporter YedA | |||
| 9840 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoZK126DcmP |
| 9845 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoZK126DcmP |
| 9850 | phosphohydrolase | |||
| 16415 | Fis family transcriptional regulator | |||
| 16420 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoZK126ORF16420P |
| 16425 | DUF2556 domain-containing protein | |||
| 19790 | cell division protein DamX | |||
| 19795 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoZK126DamP |
| 19800 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5565 | DNA-invertase | |||
| 5570 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoZK126ORF5570P |
| 5575 | anti-adapter protein IraM | |||
| 5730 | DNA-invertase | |||
| 5735 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoZK126ORF5735P |
| 5740 | 134 aa hypothetical protein | |||
| 22180 | 906 aa hypothetical protein | |||
| 22185 | R | Msa17McrC2P (100% identity) | EcoZK126McrCP | |
| 22190 | R | SenHNK130McrBP (100% identity) | EcoZK126McrBP | |
| 22195 | 113 aa hypothetical protein | |||
| ??? | type I restriction-modification system deoxyribonuclease | |||
| ??? | R | EcoXR1Mrr2P (100% identity) | EcoZK126MrrP | |
| 22220 | GTPase | |||