Pseudomonas frederiksbergensis ERGS4:02 |
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Putative Pseudomonas frederiksbergensis ERGS4:02 RM systems
Ref: Kumar,R. et al. unpublished
REBASE ref # 23241
| Sequence length: | GenBank #: | |
| Chromosome: | 5,747,498 bp | CP017886 |
| plasmid unnamed1: | 371,069 bp | CP017887 |
REBASE acronym: Pfr402
Org_num: 21116
All begin BLL42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2315 | 115 aa hypothetical protein | |||
| 2320 | R | SstB010ORF3315P (91% identity) | Pfr402ORF2330P | |
| 2325 | S | S.Pde1010ORF11405P (53% identity) | S.Pfr402ORF2330P | |
| 2330 | M | M.Pde9ORF1685P (91% identity) | M.Pfr402ORF2330P | |
| 2335 | terminase small subunit | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2160 | 192 aa hypothetical protein | |||
| 2165 | M | M.Psp1112AORFDP (93% identity) | M.Pfr402ORF2165P | |
| 2170 | 371 aa hypothetical protein | |||
| 4000 | 108 aa hypothetical protein | |||
| 4005 | M | M.Pfl1751ORF14550P (98% identity) | M.Pfr402ORF4005P | |
| 4010 | lysis protein | |||
| 4900 | 102 aa hypothetical protein | |||
| ??? | M | M.Psp26793ORFCP (90% identity) | M.Pfr402ORFAP | |
| 4910 | phage portal protein | |||
| 5110 | 196 aa hypothetical protein | |||
| 5115 | M | M1.Pto2192ORF4260P (92% identity) | GGCC | M.Pfr402ORF5115P |
| 5120 | 83 aa hypothetical protein | |||
| 21275 | 84 aa hypothetical protein | |||
| 21280 | M | M.Psp21015ORF19700P (82% identity) | M.Pfr402ORF21280P | |
| 21285 | 82 aa hypothetical protein | |||
| 22315 | 187 aa hypothetical protein | |||
| ??? | M | M.Pch17811ORF25760P (95% identity) | M.Pfr402ORF22325P | |
| 22330 | 454 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 27080 | 123 aa hypothetical protein | |||
| 27085 | M | M.PspPIoORF13280P (75% identity) | M.Pfr402ORF27085P | |
| 27090 | AAA family ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20380 | phospholipase | |||
| 20385 | R | Psp18ORF978P (82% identity) | Pfr402ORF20385P | |
| 20390 | group II intron reverse transcriptase/maturase | |||