Lactobacillus acidipiscis ACA-DC 1533 |
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Putative Lactobacillus acidipiscis ACA-DC 1533 RM systems
Ref: Papadimitriou,K. unpublished
REBASE ref # 23402
| Sequence length: | GenBank #: | |
| chromosome I: | 2,607,423 bp | LT630287 |
| plasmid pLAC3: | 13,435 bp | LT907846 |
| plasmid pLAC3: | 13,435 bp | LT992335 |
REBASE acronym: Lac1533
Org_num: 21158
All begin LAC1533_, PLAC03_P, PLAC3_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 213 | LSU m3Psi1915 methyltransferase RlmH | |||
| 214 | M | M.Lva515ORF7270P (81% identity) | M.Lac1533ORF214P | |
| 215 | S | S.Lgi2485ORF5380P (52% identity) | S1.Lac1533ORF214P | |
| 216 | S | S2.LreV43ORF4790P (53% identity) | S2.Lac1533ORF214P | |
| 217 | Type I restriction-modification system, | |||
| 218 | S | S1.LmuA1ORF8330P (32% identity) | S3.Lac1533ORF214P | |
| 219 | R | LcyORFAP (79% identity) | Lac1533ORF214P | |
| 220 | Mobile element protein | |||
| 925 | 133 aa unknown | |||
| 926 | M | M.Lpo301ORFCP (96% identity) | M.Lac1533ORF926P | |
| 927 | S | S.Lra68II (50% identity) | S1.Lac1533ORF926P | |
| 928 | R | Lpo301ORFCP (96% identity) | Lac1533ORF926P | |
| 929 | Integrase | |||
| 930 | S | Type I restriction-modification system, | S2.Lac1533ORF926P | |
| 931 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 623 | CDS_ID OB3303 | |||
| 624 | M | M.LcyORFEP (98% identity) | M.Lac1533ORF624P | |
| 625 | Arginine/ornithine antiporter ArcD | |||
| 1129 | Phage protein | |||
| 1130 | M | M.Lac726ORF7795P (95% identity) | M.Lac1533ORF1130P | |
| 1131 | 238 aa hypothetical protein | |||
| 1637 | FIG006126: DNA helicase, | |||
| 1638 | RM | PacA017ORF3855P (69% identity) | Lac1533ORF1638P | |
| 1639 | C | C.PacBCC1ORF7605P (79% identity) | C.Lac1533ORF1638P | |
| 1640 | DEAD/DEAH box helicase domain protein | |||
| plasmid pLAC3 | ||||
| 11 | nisin resistance protein (putative) | |||
| 12 | R | Lac1533PORF13P (100% identity) | Lac1533ORF13P | |
| 13 | M | M.Lac1533PORF13P (100% identity) | M.Lac1533ORF13P | |
| 14 | 48 aa hypothetical protein | |||
| plasmid pLAC3 | ||||
| 11 | nisin resistance protein (putative) | |||
| 12 | R | Lac1533ORF13P (100% identity) | Lac1533PORF13P | |
| 13 | M | M.Lac1533ORF13P (100% identity) | M.Lac1533PORF13P | |
| 14 | 48 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 560 | Mutator mutT protein | |||
| 561 | R | LcyORFCP (99% identity) | Lac1533ORF561P | |
| 562 | Inosine-5-monophosphate dehydrogenase | |||
| 930 | Type I restriction-modification system, | |||
| 931 | R | Lac726MrrP (93% identity) | Lac1533MrrP | |
| 932 | Mobile element protein | |||